PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_27183
Common NameKK1_030228
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family WRKY
Protein Properties Length: 510aa    MW: 56077.8 Da    PI: 6.4174
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_27183genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY83.61.9e-26104160259
                    --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
           WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                    +DgynWrKYGqK+vkg+ef rsYY+Ct+++C++kk++++s+ ++++++ +  g+Hnh+
  C.cajan_27183 104 KDGYNWRKYGQKHVKGNEFIRSYYKCTHPNCQAKKQLQQSN-NGHITDSICIGQHNHP 160
                    7***************************************9.***************8 PP
2WRKY104.27.2e-33289347159
                    ---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
           WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                    ++Dgy+WrKYGqK vkg+++prsYYrC+ +gCpvkk+ver+++d k+v++tYeg+H+he
  C.cajan_27183 289 VNDGYRWRKYGQKLVKGNTNPRSYYRCSNPGCPVKKHVERASHDSKIVITTYEGQHDHE 347
                    58********************************************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.802.0E-2397162IPR003657WRKY domain
PROSITE profilePS5081119.18798162IPR003657WRKY domain
SuperFamilySSF1182902.35E-2299162IPR003657WRKY domain
SMARTSM007749.0E-29103161IPR003657WRKY domain
PfamPF031062.7E-21104160IPR003657WRKY domain
Gene3DG3DSA:2.20.25.807.0E-35275349IPR003657WRKY domain
SuperFamilySSF1182901.11E-28281349IPR003657WRKY domain
PROSITE profilePS5081134.612284349IPR003657WRKY domain
SMARTSM007741.8E-37289348IPR003657WRKY domain
PfamPF031068.2E-26290346IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009863Biological Processsalicylic acid mediated signaling pathway
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0008270Molecular Functionzinc ion binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 510 aa     Download sequence    Send to blast
MVSSDKSADQ NIPSDRLQQR VSPDSDITLS QGHDTKNELS KPEGATSIPS IVAKNEGKDS  60
DQEGSTCSLP LEKHLQSPDT LSHELPPLQS NQESPSIIRE KVSKDGYNWR KYGQKHVKGN  120
EFIRSYYKCT HPNCQAKKQL QQSNNGHITD SICIGQHNHP RPQLNSTVSV ECVLPIVEQT  180
PPKPSLADVE DPNVFYDIIH EDKTSIEQGC MPQQIKPLQS IPTTKVSPVI ELKAAHLQLT  240
KAKNQAHGNE DPESKRLKKN NSNADATGVD MSTCESRVVV QTSSEVDLVN DGYRWRKYGQ  300
KLVKGNTNPR SYYRCSNPGC PVKKHVERAS HDSKIVITTY EGQHDHEIPP ARTVTHNAAT  360
NTHTTTTNGE AGTKSGGNTV FVDTGECSDL DSVSRLTEQL NDKSNTKSKD GDKLEFRVIS  420
LSNEGPEIKF SKQQQQKDNS GAKNNSVSND IVCHSSSGVP CRSNEQLEDE VKTISEGSKD  480
CLNVVAVCDT PSTENEFNKQ SAADAEPVQS
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A1e-36276351176WRKY transcription factor 1
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00094SELEXTransfer from AT2G04880Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_27183
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150361e-139AP015036.1 Vigna angularis var. angularis DNA, chromosome 3, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020234360.10.0WRKY transcription factor 1
TrEMBLA0A151S0020.0A0A151S002_CAJCA; WRKY transcription factor 1
STRINGGLYMA02G47650.10.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF93583343
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G04880.15e-78zinc-dependent activator protein-1