PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_25855
Common NameKK1_027439
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family C2H2
Protein Properties Length: 171aa    MW: 18884.4 Da    PI: 9.3333
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_25855genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H210.90.00143456123
                   EEETTTTEEESSHHHHHHHHHHT CS
        zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                   ++C+ C++ F++   L  H  +H
  C.cajan_25855 34 FECKTCNRQFPSFQALGGHRASH 56
                   89**********99999998887 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF576671.32E-832103No hitNo description
PfamPF139122.7E-133358IPR007087Zinc finger, C2H2
PROSITE profilePS501579.8273461IPR007087Zinc finger, C2H2
SMARTSM003550.163456IPR015880Zinc finger, C2H2-like
PROSITE patternPS0002803656IPR007087Zinc finger, C2H2
PfamPF139125.9E-1080105IPR007087Zinc finger, C2H2
PROSITE profilePS501579.07881108IPR007087Zinc finger, C2H2
SMARTSM003550.581103IPR015880Zinc finger, C2H2-like
PROSITE patternPS00028083103IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 171 aa     Download sequence    Send to blast
MANCLMLLSR GSDQFEATYS NTSMNNNNNN HRVFECKTCN RQFPSFQALG GHRASHKKPR  60
LMSGDMDPQL LHDSPPKPKT HECSICGLEF AIGQALGGHM RRHRAANLNG IAHNSTTLSS  120
SSGGSRSFDS SSTKKVGDKK ILVLDLNLTP FENDLEILKI GKPTTLVNYF Y
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_25855
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020231980.11e-126zinc finger protein ZAT11
TrEMBLA0A151S7G11e-124A0A151S7G1_CAJCA; Uncharacterized protein
STRINGGLYMA18G52410.14e-86(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF31634175
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G28710.16e-34C2H2 family protein