PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_25636
Common NameKK1_026093
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family HD-ZIP
Protein Properties Length: 673aa    MW: 75969.8 Da    PI: 6.303
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_25636genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox39.31.1e-124392156
                   HSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
       Homeobox 21 knrypsaeereeLAkklgLterqVkvWFqNrRakek 56
                   ++++p++ +r++LA+++gL+ +q+k+WFqN+R++ k
  C.cajan_25636  4 ECPHPDEVQRRHLASEIGLEPKQIKFWFQNKRTQIK 39
                   59******************************9988 PP
2START141.58.3e-451884102206
                    HHHHHHHHHHHHHHHC-TT-EEEE........EXCCTTEEEEEEESSS......SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-S....EEE CS
          START   2 laeeaaqelvkkalaeepgWvkss........esengdevlqkfeeskv.....dsgealrasgvvdmvlallveellddkeqWdetla....kae 80 
                    +a +a++elv++   ++p+W+  s             + + + f++++       ++ea ++sg+v  ++ +lve +ld+  +W + ++    kae
  C.cajan_25636 188 VAIDAMDELVRLLRINDPFWTNTStqdekfilN---HENYEKVFPRTNHfkgvnMHVEATKDSGIVSINCIQLVEMFLDSD-KWANLFPtiitKAE 279
                    6789********************999884444...5555555555444577999**************************.****9999999*** PP

                    EEEEECTT......EEEEEEEEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--.-TTSEE-EESSEEEEEEEECTCEEEEEEEE- CS
          START  81 tlevissg......galqlmvaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppesssvvRaellpSgiliepksnghskvtwveh 169
                    t++v++sg      galqlm+ ++ +lsplv  R+f f+Ry++q ++g+wvivdvS ds ++++   s+  + ++pSg++i++++ng s vtw+eh
  C.cajan_25636 280 TIKVLESGllgnrsGALQLMFEKMHVLSPLVQpREFQFLRYCQQIEEGVWVIVDVSFDSFRQKN---SIFHSWRYPSGCMIQEMPNGCSMVTWIEH 372
                    *****************************9977*********************9999988876...7999999********************** PP

                    EE--SSXX.HHHHHHHHHHHHHHHHHHHHHHTXXXXXX CS
          START 170 vdlkgrlp.hwllrslvksglaegaktwvatlqrqcek 206
                    v++++++  h+l++ +v++g+a ga +w   lqr ce+
  C.cajan_25636 373 VEVDDKIQaHQLYKDIVHKGIAYGAERWIMELQRICER 410
                    ******999***************************96 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5007113.621141IPR001356Homeobox domain
SMARTSM003890.0024145IPR001356Homeobox domain
CDDcd000868.69E-11342No hitNo description
PfamPF000464.3E-10439IPR001356Homeobox domain
SuperFamilySSF466892.3E-11445IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.604.7E-12447IPR009057Homeodomain-like
PROSITE patternPS0002701639IPR017970Homeobox, conserved site
PROSITE profilePS5084843.667178413IPR002913START domain
SuperFamilySSF559611.06E-32183411No hitNo description
CDDcd088751.11E-100184409No hitNo description
SMARTSM002341.4E-34187410IPR002913START domain
PfamPF018521.7E-37188410IPR002913START domain
Gene3DG3DSA:3.30.530.201.8E-9191397IPR023393START-like domain
SuperFamilySSF559611.37E-11467636No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0008289Molecular Functionlipid binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 673 aa     Download sequence    Send to blast
FIKECPHPDE VQRRHLASEI GLEPKQIKFW FQNKRTQIKN QHERADNTAL RVENDRIHSE  60
NVLMKEALKN MLCPSCGGPP YPEGKHEHVI QKMQLENAQL KEEHEKVSSL LARYLEKQMS  120
PPELQQGFIP ITGSSSHSPT TLGNSQNQET GESSCPNRSL GKQIMDSDHL LPNSSGSEGI  180
ENTLMSKVAI DAMDELVRLL RINDPFWTNT STQDEKFILN HENYEKVFPR TNHFKGVNMH  240
VEATKDSGIV SINCIQLVEM FLDSDKWANL FPTIITKAET IKVLESGLLG NRSGALQLMF  300
EKMHVLSPLV QPREFQFLRY CQQIEEGVWV IVDVSFDSFR QKNSIFHSWR YPSGCMIQEM  360
PNGCSMVTWI EHVEVDDKIQ AHQLYKDIVH KGIAYGAERW IMELQRICER FACFYVEKIP  420
NHDSEGVVNS LKGRRSVMNF SHRMIKIFCE SLTMSGKLDL PQSNMENNSG VRVSIRKNTD  480
LGQPNGMIVV AATSLWLPLH YMKVFEFFTD DKRRAQWDVL CCGNPTHRVA HISNGIHPHN  540
CISILQPFIP SENNALILQE SFTNPMGSYV VYAPTDVATM NLAIKGEDSS VLPILPSGFV  600
ISADGEPNAT LGAFNDVNIE RIGGSLLTVA FQILASSPDG INMPNMESMS AVNTLLTSTI  660
LKVKDALNCN NLE
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_25636
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020230831.10.0homeobox-leucine zipper protein HDG11
TrEMBLA0A151SB450.0A0A151SB45_CAJCA; Homeobox-leucine zipper protein HDG11 (Fragment)
STRINGGLYMA09G03000.20.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF10263398
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G73360.10.0homeodomain GLABROUS 11