PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_25566
Common NameKK1_026322
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family C2H2
Protein Properties Length: 244aa    MW: 26236.2 Da    PI: 7.9654
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_25566genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H211.40.001117139123
                    EEETTTTEEESSHHHHHHHHHHT CS
        zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                    y+C+ C+++F++   L  H  ++
  C.cajan_25566 117 YECKTCNRTFPSFQALGGHRARC 139
                    99*********999998887776 PP
2zf-C2H213.70.00019156178123
                    EEETTTTEEESSHHHHHHHHHHT CS
        zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                    ++C++Cg  F++   L  H+r+H
  C.cajan_25566 156 HECSICGAEFTSGQALGGHMRRH 178
                    78********************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF576675.06E-7116178No hitNo description
PfamPF139127.8E-11116138IPR007087Zinc finger, C2H2
SMARTSM0035551117137IPR015880Zinc finger, C2H2-like
Gene3DG3DSA:3.30.160.609.6E-4154178IPR013087Zinc finger C2H2-type/integrase DNA-binding domain
SMARTSM003550.01156178IPR015880Zinc finger, C2H2-like
PROSITE profilePS5015710.242156183IPR007087Zinc finger, C2H2
PfamPF139129.5E-13156180IPR007087Zinc finger, C2H2
PROSITE patternPS000280158178IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003676Molecular Functionnucleic acid binding
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 244 aa     Download sequence    Send to blast
MNTEAMEEHV SSNNDSANIA KGKRTKRRLR PLSPCLVATT TTVTTTAVAM MSSCSSASGD  60
GGASLSSTTF EDDEEDMANC LILLAQGKGG DSRGKTLPDD VKKTEKGSTK SIDFYVYECK  120
TCNRTFPSFQ ALGGHRARCG NNKGGSNFHG NKSKIHECSI CGAEFTSGQA LGGHMRRHRA  180
SNNNNTVHKT TSDDAVQVKP RNLLELDLNL PAPEEDLRDS KFQFPANQNS IMLSAAPALV  240
GCHY
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription factor that may be involved in stress responses. {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_25566
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: By gibberellin and H(2)O(2). Down-regulated by ascorbate. {ECO:0000269|PubMed:12837949, ECO:0000269|PubMed:16244149}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT0945954e-91BT094595.1 Soybean clone JCVI-FLGm-18J24 unknown mRNA.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020230992.11e-148zinc finger protein ZAT5
SwissprotQ681X44e-49ZAT5_ARATH; Zinc finger protein ZAT5
TrEMBLA0A151SAH10.0A0A151SAH1_CAJCA; Uncharacterized protein
STRINGXP_007150141.11e-96(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF58634141
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G28200.11e-49C2H2 family protein
Publications ? help Back to Top
  1. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]