PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_25281
Common NameKK1_025331
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family HSF
Protein Properties Length: 514aa    MW: 56492.7 Da    PI: 4.5619
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_25281genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind112.13.9e-35341252102
                    HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXXX CS
   HSF_DNA-bind   2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkelleki 97 
                    Fl+k+ye+++d+++++++sws + nsfvv+++ efa+++Lpk+Fkh+nf+SFvRQLn+YgF+kv+ ++         weF+++ F +g+k+ll+ i
  C.cajan_25281  34 FLSKTYEMVDDPSTDSVVSWSPTDNSFVVWNPPEFARDLLPKHFKHNNFSSFVRQLNTYGFRKVDPDR---------WEFANEGFLRGQKHLLKFI 120
                    9********************999*****************************************999.........******************* PP

                    XXXXX CS
   HSF_DNA-bind  98 krkks 102
                     r+k 
  C.cajan_25281 121 TRRKP 125
                    **986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.102.3E-3928117IPR011991Winged helix-turn-helix DNA-binding domain
SuperFamilySSF467853.81E-3629123IPR011991Winged helix-turn-helix DNA-binding domain
SMARTSM004158.7E-6330123IPR000232Heat shock factor (HSF)-type, DNA-binding
PRINTSPR000564.0E-203457IPR000232Heat shock factor (HSF)-type, DNA-binding
PfamPF004471.3E-3134123IPR000232Heat shock factor (HSF)-type, DNA-binding
PRINTSPR000564.0E-207284IPR000232Heat shock factor (HSF)-type, DNA-binding
PROSITE patternPS0043407397IPR000232Heat shock factor (HSF)-type, DNA-binding
PRINTSPR000564.0E-208597IPR000232Heat shock factor (HSF)-type, DNA-binding
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009408Biological Processresponse to heat
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 514 aa     Download sequence    Send to blast
MDGATGGAGS GSGEVSTAAP APAPIPNANA PAPFLSKTYE MVDDPSTDSV VSWSPTDNSF  60
VVWNPPEFAR DLLPKHFKHN NFSSFVRQLN TYGFRKVDPD RWEFANEGFL RGQKHLLKFI  120
TRRKPAHGHN HQQAQQSHGQ SSSVGACVEV GKFGLEEEVE ILKRDKNVLM QELVRLRQQQ  180
QATDNQLQTM VQRLQGMEQR QQQMMSFLAK AVQSPGFLAQ FVQQNDSNRR ITEANKKRRL  240
KQEGIGEMEH NASSDGQIVK YQPLVNEAAK AMLRQIMKLD TSRLDSFSNS PDNYLIGDHS  300
SSSSAMDMGN SLSRTSGVTL QEVPPTAAQS CHVPSATGTQ GQGLSTEKSE IPSFPQVAPC  360
EEVAKAQYPN INVSVGEPNA TAIPVTQTNE IMPDLSPIPD MVAGNILDIA EENYLAPETG  420
SGGYIDPTSL GVNGSLSIDF DSISPETDID DLFNNPHFWD DIVRTPVSEE IETNGAEVCM  480
ENEVQPMENG WDKSQHMDQL TEQMGLLSSD TERI
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5d5u_B9e-2761231129Heat shock factor protein 1
5d5v_B9e-2761231129Heat shock factor protein 1
5d5v_D9e-2761231129Heat shock factor protein 1
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1234241NKKRRLKQ
2235240KKRRLK
Functional Description ? help Back to Top
Source Description
UniProtDNA-binding protein that specifically binds heat shock promoter elements (HSE) and activates transcription. {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_25281
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAY4588430.0AY458843.1 Glycine max heat shock factor protein hsf8-related mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020229954.10.0heat shock factor protein HSF8
SwissprotQ401521e-177HSF8_SOLLC; Heat shock factor protein HSF8
TrEMBLA0A151SDD00.0A0A151SDD0_CAJCA; Heat shock factor protein HSF8
STRINGGLYMA16G13400.10.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF18433169
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G32330.11e-123heat shock transcription factor A1D
Publications ? help Back to Top
  1. Zhu B, et al.
    Identification and characterization of a novel heat shock transcription factor gene, GmHsfA1, in soybeans (Glycine max).
    J. Plant Res., 2006. 119(3): p. 247-56
    [PMID:16570125]
  2. Cai SY, et al.
    HsfA1a upregulates melatonin biosynthesis to confer cadmium tolerance in tomato plants.
    J. Pineal Res., 2017.
    [PMID:28095626]
  3. Zhou J, et al.
    Heat Shock Factor HsfA1a Is Essential for R Gene-Mediated Nematode Resistance and Triggers H2O2 Production1.
    Plant Physiol., 2018. 176(3): p. 2456-2471
    [PMID:29339397]