PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_24999
Common NameKK1_027170
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family Dof
Protein Properties Length: 320aa    MW: 35075.3 Da    PI: 7.0054
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_24999genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof126.77.2e-4053113262
         zf-Dof   2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 
                    +e+alkcprC+st+tkfCyynnyslsqPryfCk+CrryWtkGG+lrn+PvGgg+rknkk+s
  C.cajan_24999  53 QEQALKCPRCESTHTKFCYYNNYSLSQPRYFCKTCRRYWTKGGTLRNIPVGGGCRKNKKVS 113
                    5799******************************************************976 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
ProDomPD0074783.0E-2747107IPR003851Zinc finger, Dof-type
PfamPF027011.7E-3355111IPR003851Zinc finger, Dof-type
PROSITE profilePS5088429.05957111IPR003851Zinc finger, Dof-type
PROSITE patternPS0136105995IPR003851Zinc finger, Dof-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 320 aa     Download sequence    Send to blast
MGFSSLHVCM DSSDHCLQGT IHEEYGGMDS SSPSGDMLPC SRPMTEKRLR PPQEQALKCP  60
RCESTHTKFC YYNNYSLSQP RYFCKTCRRY WTKGGTLRNI PVGGGCRKNK KVSTKKHNEP  120
QPPITQNQPH PAPSYLHNHN DLQHSFLDVQ FSHLNNLLGT NAGALVNPNF MLENPRPIDF  180
VESRLDDMNM IRSSTRNFDL LENSDVSVGG GVGVGDVSGY SGLPLSYQAL SSSPAFGGMS  240
LDGSIRNVGT YIMDSCQRFM LPCDGGDNSL NGSIDVKPNP KLLSLEWDQG CSDAEKVSLG  300
YLNGSGSWIG YGSSATNPLV
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_24999
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankEU0283311e-161EU028331.1 Glycine max clone BAC gmw1-89M01 genomic sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020231769.10.0dof zinc finger protein DOF5.6
TrEMBLA0A151S8260.0A0A151S826_CAJCA; Dof zinc finger protein DOF5.6
STRINGGLYMA17G09710.20.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF50923456
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G62940.13e-41Dof family protein