PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_24323
Common NameKK1_025190
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family ARR-B
Protein Properties Length: 579aa    MW: 65504 Da    PI: 5.1507
Description ARR-B family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_24323genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like772.4e-24199252155
        G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                    k+r++W+ +LH++Fv+av+q+ G +k  Pk+il+lm+v+ Lt+e+v+SHLQkYRl
  C.cajan_24323 199 KARVVWSVDLHQKFVKAVNQI-GFDKVGPKKILDLMNVPWLTRENVASHLQKYRL 252
                    68*******************.9*******************************8 PP
2Response_reg79.79.9e-27201281109
                    EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTTE CS
   Response_reg   1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaGa 94 
                    vl+vdD+p+ +++l+++l+k  y ev+++  + eal++l+e++  +D+++ D++mp+mdG++ll++   e  +lp+i+++  ge + + + ++ Ga
  C.cajan_24323  20 VLVVDDDPTWLRILEKMLKKCLY-EVTTCCLAIEALKKLRERKdaYDIVISDVNMPDMDGFKLLEQVGLEM-DLPVIMMSVDGETSRVMKGVQHGA 113
                    89*********************.***************888889**********************6644.8*********************** PP

                    SEEEESS--HHHHHH CS
   Response_reg  95 kdflsKpfdpeelvk 109
                     d+l Kp+ ++el++
  C.cajan_24323 114 CDYLLKPIRMKELRN 128
                    ************987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF521723.98E-3517144IPR011006CheY-like superfamily
Gene3DG3DSA:3.40.50.23001.9E-4317171No hitNo description
SMARTSM004481.6E-3118130IPR001789Signal transduction response regulator, receiver domain
PROSITE profilePS5011042.57619134IPR001789Signal transduction response regulator, receiver domain
PfamPF000725.9E-2420129IPR001789Signal transduction response regulator, receiver domain
CDDcd001563.55E-2921134No hitNo description
SuperFamilySSF466894.3E-17197256IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.609.5E-28197257IPR009057Homeodomain-like
TIGRFAMsTIGR015571.7E-21199252IPR006447Myb domain, plants
PfamPF002491.8E-7201251IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0000160Biological Processphosphorelay signal transduction system
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009735Biological Processresponse to cytokinin
GO:0010082Biological Processregulation of root meristem growth
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 579 aa     Download sequence    Send to blast
MDNGCFSSPR HDAFPAGLRV LVVDDDPTWL RILEKMLKKC LYEVTTCCLA IEALKKLRER  60
KDAYDIVISD VNMPDMDGFK LLEQVGLEMD LPVIMMSVDG ETSRVMKGVQ HGACDYLLKP  120
IRMKELRNIW QHVFRKRMHE ARDFESLEGF EGIHLMRNGP DHDEGNLFAV EEITSMKKRK  180
DADNKHDDKE FGDHSPTKKA RVVWSVDLHQ KFVKAVNQIG FDKVGPKKIL DLMNVPWLTR  240
ENVASHLQKY RLYLSRLQKE NDQKSSSSGI KHSDSPLKDP GSFSFLNIAN KQENDVAIDN  300
LSYSDGSLLL QMDTTSHEGD LKGIVSEPTT EKRRASTSDI PDPKIQKASQ MSLNQPFAPV  360
ESSEANHAVF DCTLPTQYSW SEFPKGALKE EQKTLVQIED SFSQLPLHGT QHHIQVDQSQ  420
SIASINSNPP ITDEEVVASL ETKPLYIGYK NDYVSPVSSK GSAVEAFPSQ SKNLVVNDHS  480
SEPIFTSNMG LKTRGFNLDC ISDLDFYRRN LLLSGEAAFA PLEEDLNFFL LHGECYNMNF  540
GLQNIDMSEY YDPRLIAEVP SHFYDSADYS SLDQSLFIA
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1irz_A6e-17198257463ARR10-B
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00010PBMTransfer from AT1G67710Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_24323
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020229839.10.0two-component response regulator ARR11 isoform X1
TrEMBLA0A151SDS80.0A0A151SDS8_CAJCA; Two-component response regulator ARR11
STRINGGLYMA05G27670.20.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF39993360
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G67710.11e-117response regulator 11