PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_22707
Common NameKK1_023379
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family bHLH
Protein Properties Length: 479aa    MW: 52907.8 Da    PI: 7.1347
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_22707genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH17.67e-063704081154
                    HHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
            HLH  11 rRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                     R +++ +++  L++l+ +      +K + a++L +A+eYIk L
  C.cajan_22707 370 VRKEKMGDRITALQQLVSPF-----GKTDTASVLSEAIEYIKFL 408
                    5778999**********998.....8****************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088812.576359408IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474591.44E-11369426IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000836.83E-7369412No hitNo description
SMARTSM003530.0049370414IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.102.6E-9373416IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 479 aa     Download sequence    Send to blast
MSDDQFQASG NWWESARNVK FESGESQSSS SGLTNMGNYG WQNHDMARSS SVDNSASGGS  60
TVVFHDQKQL QLQHQHHQHH HHHHHDSATS TNDPNLHMMG LGLSSQAMDW NQASLQLRGE  120
KGSDNSFRSM LQENLSSPGS SFQQESGNNN NIGLSHHHHQ QVHWRPEKLF SAESSSNDQF  180
KRGFSLDQTQ FSSPQYSSGD STVTSQGLPC SFQMDYVGNP SSILQGLLGQ ESNNSSNNNN  240
NQPHQGAGAM NFPYSATTYG LNSNIELVPS WSKVPQFLRA SPPKQQPNNQ LHFTNNAPFW  300
NANSDPAIKD ARSSFIPSLQ PPFSTSNFDV QSKNICDVRD SGGVVKKSGG EPAPKRPRNE  360
TPSPLPAFKV RKEKMGDRIT ALQQLVSPFG KTDTASVLSE AIEYIKFLHE QVTVLSTPYM  420
KSGAPIQHQQ SSGKSKESEG PKQDLRSRGL CLVPVSSTFP VTNEQPFEFW NPTYGGTYR
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_22707
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020222620.10.0transcription factor bHLH123
TrEMBLA0A151T1M60.0A0A151T1M6_CAJCA; Transcription factor bHLH123 family
STRINGXP_007133119.10.0(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF111833106
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G20640.16e-77bHLH family protein