PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_22309
Common NameKK1_022967
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family CAMTA
Protein Properties Length: 1076aa    MW: 121019 Da    PI: 5.8137
Description CAMTA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_22309genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CG-1180.52e-56161304118
           CG-1   4 ekkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfqrrcy 99 
                     ++rwl++ ei++iL n++ +++t+e+++rp+sgsl+L++rk++ryfrkDG++w+kkkdgktv+E+hekLKvg+v+vl+cyYah+een++fqrr+y
  C.cajan_22309  16 AQHRWLRPAEICEILRNYRMFHITSEPHNRPPSGSLFLFDRKVLRYFRKDGHNWRKKKDGKTVKEAHEKLKVGSVDVLHCYYAHGEENENFQRRSY 111
                    49********************************************************************************************** PP

           CG-1 100 wlLeeelekivlvhylevk 118
                    w+Le ++ +iv+vhylevk
  C.cajan_22309 112 WMLEPDMMHIVFVHYLEVK 130
                    ****************985 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5143782.059135IPR005559CG-1 DNA-binding domain
SMARTSM010768.9E-8112130IPR005559CG-1 DNA-binding domain
PfamPF038591.9E-5015129IPR005559CG-1 DNA-binding domain
SuperFamilySSF812961.91E-14497582IPR014756Immunoglobulin E-set
PfamPF018338.5E-5497572IPR002909IPT domain
Gene3DG3DSA:1.25.40.201.7E-19680792IPR020683Ankyrin repeat-containing domain
PROSITE profilePS5029719.969680791IPR020683Ankyrin repeat-containing domain
SuperFamilySSF484031.12E-19685791IPR020683Ankyrin repeat-containing domain
CDDcd002045.91E-16686789No hitNo description
SMARTSM002482200697726IPR002110Ankyrin repeat
PfamPF127966.4E-7702792IPR020683Ankyrin repeat-containing domain
PROSITE profilePS5008811.194730762IPR002110Ankyrin repeat
SMARTSM002481.7E-4730759IPR002110Ankyrin repeat
SMARTSM002482100769798IPR002110Ankyrin repeat
SMARTSM000150.14899921IPR000048IQ motif, EF-hand binding site
PROSITE profilePS500968.316900929IPR000048IQ motif, EF-hand binding site
SuperFamilySSF525402.44E-7901950IPR027417P-loop containing nucleoside triphosphate hydrolase
PfamPF006120.0026902920IPR000048IQ motif, EF-hand binding site
SMARTSM000150.0034922944IPR000048IQ motif, EF-hand binding site
PROSITE profilePS500969.432923947IPR000048IQ motif, EF-hand binding site
PfamPF006122.3E-4925944IPR000048IQ motif, EF-hand binding site
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009409Biological Processresponse to cold
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0071275Biological Processcellular response to aluminum ion
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0005515Molecular Functionprotein binding
Sequence ? help Back to Top
Protein Sequence    Length: 1076 aa     Download sequence    Send to blast
MPYYQCADIQ QLQFEAQHRW LRPAEICEIL RNYRMFHITS EPHNRPPSGS LFLFDRKVLR  60
YFRKDGHNWR KKKDGKTVKE AHEKLKVGSV DVLHCYYAHG EENENFQRRS YWMLEPDMMH  120
IVFVHYLEVK GNKNIVVNTE GDEVLSDSQK VTSPSSSFPT NHSGVPSLST DSVSPTSSLM  180
SLREDADSED IHQASSGLRP LHESQHMGNG PFTGKIDAGL NSSYPMHPLS GDHGQSTISG  240
VDYIPVPVAH GDKFRGNDTA YIDGHKTHGV APWDTVLEST AKFHNDPSLA SFPSITSSST  300
GNVLEQDHTI FGDLIMSKKG LTADAEISQS LQANWQIPFE DNSGDTPTLT QSFGLQFGSD  360
YGTGLLGNYT RNASSEIAPV LYNFHGESKE QTMQQNYPEE HADEQSQYAV KSNSANKIPD  420
EETINYGLNV KYALLDRDES LKKVDSFSRW VTKELGEVAD LNMQSSPGIS WSTDECQHVI  480
DDTSLSPSLS QDQLFSINDF SPKWAYAESE IEVLIIGSFL KSQPEVTTCK WSCMFGEVEV  540
PDEVLADGIL CCQAPRHKVG RVPFYVTCSN RLACSEVREF DFREGFARNV DFADFYNSST  600
EMLLHLRLED FLSLKPVDPS NHAFEGDLEK RNVIFKLISL REEEEYSIKE ESTTELDISQ  660
HKAKEHLFLR QVKEKLYSWL LHKVTESGKG PNILDEDGQG VLHLAAVLDY DWAINPIISA  720
GVNINFRDVN GWTALHWAAS YGRERTVAVL VSMGADCGAS TDPSPAFRSG RSAADLASSN  780
GHKGISGFLA ESSLTHHLET LTMDDQKSGM KVVQTVSERT ATPVIYGDMP DALCLKDSLT  840
AVRNATQAAD RIHQVYRMQS FQRKQLTQCE GDDQLGLSDQ QALSLLASRA GKSGQGDGLA  900
NAAATQIQKK FRGWKKRKEF LMIRQRIVKI QAHVRGHQVR KQYKTIIWSV GILEKVILRW  960
RRKGSGLRGF RPDAVNKVPS QQNDSPKEDD YDYLKEGRKQ KEEIIQKALS RVKSMAQYPE  1020
ARAQYRRLLN VVEDFRQTKA SDKGFLNSEE TVESVEDLID IDMLLDDDNF IPIAFD
Functional Description ? help Back to Top
Source Description
UniProtTranscription activator that binds to the DNA consensus sequence 5'-[ACG]CGCG[GTC]-3' (By similarity). Regulates transcriptional activity in response to calcium signals (Probable). Binds calmodulin in a calcium-dependent manner (By similarity). Involved in freezing tolerance in association with CAMTA1 and CAMTA3. Contributes together with CAMTA1 and CAMTA3 to the positive regulation of the cold-induced expression of DREB1A/CBF3, DREB1B/CBF1 and DREB1C/CBF2 (PubMed:23581962). Involved together with CAMTA3 and CAMTA4 in the positive regulation of a general stress response (PubMed:25039701). Involved in tolerance to aluminum. Binds to the promoter of ALMT1 transporter and contributes to the positive regulation of aluminum-induced expression of ALMT1 (PubMed:25627216). {ECO:0000250|UniProtKB:Q8GSA7, ECO:0000269|PubMed:23581962, ECO:0000269|PubMed:25039701, ECO:0000269|PubMed:25627216, ECO:0000305|PubMed:11925432}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00043PBMTransfer from AT5G64220Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_22309
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: By salt, wounding, abscisic acid, H(2)O(2) and salicylic acid (PubMed:12218065). Induced by aluminum (PubMed:25627216). {ECO:0000269|PubMed:12218065, ECO:0000269|PubMed:25627216}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150380.0AP015038.1 Vigna angularis var. angularis DNA, chromosome 5, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020222227.10.0calmodulin-binding transcription activator 2 isoform X1
RefseqXP_020222228.10.0calmodulin-binding transcription activator 2 isoform X2
SwissprotQ6NPP40.0CMTA2_ARATH; Calmodulin-binding transcription activator 2
TrEMBLA0A151T0H30.0A0A151T0H3_CAJCA; Calmodulin-binding transcription activator 2
STRINGGLYMA15G05900.20.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF74062642
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G64220.20.0Calmodulin-binding transcription activator protein with CG-1 and Ankyrin domains
Publications ? help Back to Top
  1. Benn G, et al.
    A key general stress response motif is regulated non-uniformly by CAMTA transcription factors.
    Plant J., 2014. 80(1): p. 82-92
    [PMID:25039701]
  2. Kidokoro S, et al.
    Different Cold-Signaling Pathways Function in the Responses to Rapid and Gradual Decreases in Temperature.
    Plant Cell, 2017. 29(4): p. 760-774
    [PMID:28351986]