PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_22006
Common NameKK1_022658
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family DBB
Protein Properties Length: 295aa    MW: 32390.3 Da    PI: 6.362
Description DBB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_22006genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-B_box20.11.3e-06447542
       zf-B_box  5 kCpeHeekelqlfCedCqqllCedClleeHkg......Htvvpl 42
                    C+ +e  e++  C  ++  lC +C ++ H        H++vpl
  C.cajan_22006  4 QCNVCEAAEAKVLCCADEAALCWECDEKVHAAnklatkHQRVPL 47
                   7******99*********************66899999999986 PP
2zf-B_box26.81.1e-085495338
       zf-B_box  3 erkCpeHeekelqlfCedCqqllCedClleeHkg......Ht 38
                   ++kC+ ++e    +fC +++ llC++C +++H        H+
  C.cajan_22006 54 MPKCDICQEMVGYFFCLEDRALLCRNCDVSIHTAnacvsgHQ 95
                   799*******9*********************5455666665 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5011910.765147IPR000315B-box-type zinc finger
CDDcd000213.97E-8347No hitNo description
SMARTSM003361.8E-10447IPR000315B-box-type zinc finger
PfamPF006433.8E-5447IPR000315B-box-type zinc finger
SMARTSM003363.6E-155299IPR000315B-box-type zinc finger
PROSITE profilePS501199.0015299IPR000315B-box-type zinc finger
PfamPF006431.2E-65495IPR000315B-box-type zinc finger
CDDcd000211.51E-95599No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009641Biological Processshade avoidance
GO:0009658Biological Processchloroplast organization
GO:0009718Biological Processanthocyanin-containing compound biosynthetic process
GO:0010099Biological Processregulation of photomorphogenesis
GO:0015995Biological Processchlorophyll biosynthetic process
GO:0016607Cellular Componentnuclear speck
GO:0008270Molecular Functionzinc ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 295 aa     Download sequence    Send to blast
MKIQCNVCEA AEAKVLCCAD EAALCWECDE KVHAANKLAT KHQRVPLSLS ASHMPKCDIC  60
QEMVGYFFCL EDRALLCRNC DVSIHTANAC VSGHQRFLLT GVRVGLEATE RGASSSSVKS  120
QSGEKMSGAK SPSISRNVSS LPPHSNLNEV LPLQMGGIEE FPPNRVSYGG GYTAGNISQW  180
PIEEFLGLNE FSQYYNYMDG SSKADSGKHG DSDSSVLRSS EEEMDDDGFL GRVPDSSWTV  240
PQIPSPPTAS GLHWPKVPHY TSDNAMFVPD ICFNRPQQPH HAQHNSVISK RRRQQ
Functional Description ? help Back to Top
Source Description
UniProtActs as positive regulator of seedling photomorphogenesis and light-regulated inhibition of hypocotyl elongation, independently and in concert with HY5 and BBX21 (PubMed:18540109, PubMed:18796637, PubMed:18182030, PubMed:21427283). Acts as a positive regulator of de-etiolation and influences chloroplast biogenesis and function through regulation of genes encoding chloroplast proteins (PubMed:18182030). Acts downstream of COP1 and plays an important role in early and long-term adjustment of the shade avoidance syndrome (SAS) responses in natural environments (PubMed:21070414). Regulates the expression of genes responsive to light hormone signals which may contribute to optimal seedling development (PubMed:21427283). {ECO:0000269|PubMed:18182030, ECO:0000269|PubMed:18540109, ECO:0000269|PubMed:18796637, ECO:0000269|PubMed:21070414, ECO:0000269|PubMed:21427283}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_22006
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: By light. {ECO:0000269|PubMed:18182030}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150391e-132AP015039.1 Vigna angularis var. angularis DNA, chromosome 6, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020214951.10.0B-box zinc finger protein 22
SwissprotQ9SYM23e-88BBX22_ARATH; B-box zinc finger protein 22
TrEMBLA0A151TPN20.0A0A151TPN2_CAJCA; Putative salt tolerance-like protein At1g78600 family
STRINGGLYMA09G14880.10.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF45663453
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G78600.15e-88light-regulated zinc finger protein 1