PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_21183
Common NameDof20, KK1_021812
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family Dof
Protein Properties Length: 307aa    MW: 33179.1 Da    PI: 9.8106
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_21183genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof123.57.1e-3967127262
         zf-Dof   2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 
                    +e+alkcprC+stntkfCy+nnyslsqPr+fCk+CrryWt+GGalrnvPvGgg+r+nkk++
  C.cajan_21183  67 PEAALKCPRCESTNTKFCYFNNYSLSQPRHFCKTCRRYWTRGGALRNVPVGGGCRRNKKNK 127
                    57889*****************************************************976 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
ProDomPD0074787.0E-3451120IPR003851Zinc finger, Dof-type
PfamPF027017.6E-3370125IPR003851Zinc finger, Dof-type
PROSITE profilePS5088429.53471125IPR003851Zinc finger, Dof-type
PROSITE patternPS01361073109IPR003851Zinc finger, Dof-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0044212Molecular Functiontranscription regulatory region DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 307 aa     Download sequence    Send to blast
MVFSSIPVFV DPPNWQQQPN HPQANGSDNT QLLPPLPPQQ HHVGGSVGSI RPGSMADRAR  60
LAKIPPPEAA LKCPRCESTN TKFCYFNNYS LSQPRHFCKT CRRYWTRGGA LRNVPVGGGC  120
RRNKKNKRSR SKSPASSEKQ TLSGSSSSIP SAGTTTHDLS GQLPQPPNLP FMSSLHNLNR  180
YAVGNMGLGL RDIHEQNNHI GFQIGGNSAA AGGGMDQWRL QEVPFLNGFE SASGGSYPFQ  240
NESIEAASAL VGNIATNSRV SQMPSVKMEE SGAMNLSRAP LSVSENNQYY SWIDMSGLAS  300
SSANHLL
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00281DAPTransfer from AT2G28810Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_21183
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020214911.10.0dof zinc finger protein DOF2.2
TrEMBLA0A0K8K6470.0A0A0K8K647_CAJCA; Dof protein
STRINGGLYMA12G06880.20.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF65634143
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G55370.11e-44OBF-binding protein 3
Publications ? help Back to Top
  1. Malviya N, et al.
    Genome wide in silico characterization of Dof gene families of pigeonpea (Cajanus cajan (L) Millsp.).
    Mol. Biol. Rep., 2015. 42(2): p. 535-52
    [PMID:25344821]