PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

C.cajan_21182

Common Name

Dof21, KK1_021811

Organism

Cajanus cajan

Taxonomic ID

3821

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus

Family

Dof

Protein Properties

Length: 303aa MW: 32943.9 Da PI: 9.4446

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
C.cajan_21182	genome	IIPG	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	120.9	4.4e-38	69	129	2	62
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 +e+alkcprC+stntkfCy+nnyslsqPr+fCk+CrryWt+ GalrnvPvGgg+rknkk++ C.cajan_21182 69 PEAALKCPRCESTNTKFCYFNNYSLSQPRHFCKTCRRYWTREGALRNVPVGGGCRKNKKNK 129 57889*****************************************************976 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
ProDom	PD007478	4.0E-32	51	122	IPR003851	Zinc finger, Dof-type
Pfam	PF02701	3.1E-32	72	127	IPR003851	Zinc finger, Dof-type
PROSITE profile	PS50884	28.705	73	127	IPR003851	Zinc finger, Dof-type

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 303 aa Download sequence Send to blast
MVFSSIPVFV DPPNWQQQPN NPQANGSDNS QLLPPLPPQQ PHVGGFVGSI RPGSMTMADR 60 ARLAKIPPPE AALKCPRCES TNTKFCYFNN YSLSQPRHFC KTCRRYWTRE GALRNVPVGG 120 GCRKNKKNKR SHSNKSPASS EKQTLSGSSH ELIGQLPQSP SLPFMASLHN LNRYAVGNMG 180 LGMPDIHGQN DHTGFQIGDG AGNSSTAGGG INQWRLQQVP FFNGFESTSV ASYPFQNESI 240 EAVSGLVGDM ATNSRVSQMP SVKMEETGAM NLSRTPLTAS ENNQYYSWTD ISGLASSSAR 300 HVL

Cis-element ? help Back to Top
Source	Link
PlantRegMap	C.cajan_21182

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_020214836.1	0.0	dof zinc finger protein DOF2.2
TrEMBL	A0A0K8K638	0.0	A0A0K8K638_CAJCA; Dof protein
STRING	GLYMA12G06880.2	1e-169	(Glycine max)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF656	34	143

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G55370.1	3e-45	OBF-binding protein 3

Publications ? help Back to Top
Malviya N, et al. Genome wide in silico characterization of Dof gene families of pigeonpea (Cajanus cajan (L) Millsp.). Mol. Biol. Rep., 2015. 42(2): p. 535-52 [PMID:25344821]