PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_21092
Common NameKK1_021721
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family GRAS
Protein Properties Length: 406aa    MW: 46191 Da    PI: 7.6981
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_21092genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS314.22.8e-96234052374
           GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaa.rlarsvselykalppsetseknsseelaalklfsevsPilkfshl 96 
                     +lL +cA   +sg+ + a+ +L +ls lasp+gdp+qR+a+yfteALa  ++a++  ++ k l+  +t +  + e+ ++++ f+++ P+lk+++l
  C.cajan_21092  23 ANLLKDCAAYTESGNINGADIALYHLSRLASPNGDPLQRVATYFTEALAYcQVAKNLRGVPKVLRLVKTIS--TLEQEFVRQQFFNLYPFLKIAYL 116
                    67999*******************************************96378889999999998888874..6666678999************* PP

           GRAS  97 taNqaIleavegeervHiiDfd.isqGlQWpaLlqaLasRpegppslR..iTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledl 189
                    ++NqaI ea++ge ++ ++D++  s  +QW+ L+q L + + ++p ++  iT++++    +ke le+++  L   A++l+  f+fn+ v+++le+l
  C.cajan_21092 117 ITNQAIIEAMQGEIAINVLDLSpSSDAFQWIRLMQGLKEHSPNTPCMKitITAIHE----KKEVLEQMELLLGAEAKRLDFYFQFNP-VVSNLESL 207
                    *********************945789*************9888866611567777....9**************************.799***** PP

           GRAS 190 eleeLrvkpgEalaVnlvlqlhrll...............desvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfds 270
                    ++e+L +k+gE la+++vlqlh+ll                ++ +++ + + +L+ +++l+P+v+v++eqe++ n++s+ er+ +al++y +lfd+
  C.cajan_21092 208 DPEKLPIKRGEPLAISCVLQLHSLLatadddmvkmralspFSPCPSH-KMECFLNGLWKLQPRVLVITEQESNVNGPSLTERVYKALDFYGTLFDC 302
                    **********************************9999863333333.4777******************************************** PP

           GRAS 271 leaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrp 366
                    lea+ +r+  er+ +E++llg+ei+n+vaceg er+erhe+l +W  rle aGF+ vp+s +    a+ ll+ +  + y++++++++l+++W + p
  C.cajan_21092 303 LEASTSRTLVERSLMEKMLLGEEIKNIVACEGVERKERHEKLVTWIPRLELAGFGRVPISPYGIWLASKLLQSYVPR-YHIHQKHKCLFICWDKIP 397
                    **************************************************************************966.****************** PP

           GRAS 367 LvsvSaWr 374
                    L+svSaW+
  C.cajan_21092 398 LFSVSAWK 405
                    *******8 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5098545.4151386IPR005202Transcription factor GRAS
PfamPF035149.9E-9423405IPR005202Transcription factor GRAS
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
Sequence ? help Back to Top
Protein Sequence    Length: 406 aa     Download sequence    Send to blast
MLGPLYQQVV ERMNLESKGI LLANLLKDCA AYTESGNING ADIALYHLSR LASPNGDPLQ  60
RVATYFTEAL AYCQVAKNLR GVPKVLRLVK TISTLEQEFV RQQFFNLYPF LKIAYLITNQ  120
AIIEAMQGEI AINVLDLSPS SDAFQWIRLM QGLKEHSPNT PCMKITITAI HEKKEVLEQM  180
ELLLGAEAKR LDFYFQFNPV VSNLESLDPE KLPIKRGEPL AISCVLQLHS LLATADDDMV  240
KMRALSPFSP CPSHKMECFL NGLWKLQPRV LVITEQESNV NGPSLTERVY KALDFYGTLF  300
DCLEASTSRT LVERSLMEKM LLGEEIKNIV ACEGVERKER HEKLVTWIPR LELAGFGRVP  360
ISPYGIWLAS KLLQSYVPRY HIHQKHKCLF ICWDKIPLFS VSAWKF
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5b3g_A4e-3334041378Protein SCARECROW
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_21092
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020214456.10.0scarecrow-like protein 3
TrEMBLA0A151TM060.0A0A151TM06_CAJCA; Scarecrow-like protein 3
STRINGXP_007131457.10.0(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF1632579
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G50420.11e-114scarecrow-like 3