PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_20906
Common NameKK1_021533
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family C2H2
Protein Properties Length: 269aa    MW: 30324.1 Da    PI: 10.1999
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_20906genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H211.40.00098165187123
                    EEETTTTEEESSHHHHHHHHHHT CS
        zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                    +kC +Cgk F ++  L  H  +H
  C.cajan_20906 165 FKCDKCGKIFQSHQALGGHKANH 187
                    89*********999998888877 PP
2zf-C2H217.61.1e-05216238123
                    EEETTTTEEESSHHHHHHHHHHT CS
        zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                    ++Cp+C+k+F++   L  H ++H
  C.cajan_20906 216 FECPYCSKVFKSARALGGHKKVH 238
                    89**************9999998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5015710.741165192IPR007087Zinc finger, C2H2
PfamPF139126.1E-9165189IPR007087Zinc finger, C2H2
SuperFamilySSF576677.97E-11165238No hitNo description
SMARTSM003550.066165187IPR015880Zinc finger, C2H2-like
PROSITE patternPS000280167187IPR007087Zinc finger, C2H2
Gene3DG3DSA:3.30.160.601.4E-4212238IPR013087Zinc finger C2H2-type/integrase DNA-binding domain
PfamPF139121.3E-8215238IPR007087Zinc finger, C2H2
PROSITE profilePS5015710.824216243IPR007087Zinc finger, C2H2
SMARTSM003550.0019216238IPR015880Zinc finger, C2H2-like
PROSITE patternPS000280218238IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003676Molecular Functionnucleic acid binding
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 269 aa     Download sequence    Send to blast
MGGHMRSHFA KLPIPPKPET KNQALDNSAE LTYRPNQSAS SQTSQSQKKP AQNFRSLKRS  60
LFSFSTNTNR ENEFRPYPKN PTRKRSKCHR KFIAAIEMKA DSEQVTPKPD SLFAEEAARS  120
LLMLSKDKWP ESKEIKNQEV KEIRAKDKED GRDDLLAQIP SQANFKCDKC GKIFQSHQAL  180
GGHKANHKKN ENTWQGGDPD NDGTSKKSDD VGEKVFECPY CSKVFKSARA LGGHKKVHFS  240
YNKANAQSSA NQFGRKLVVD LNFPAPIED
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_20906
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020214422.10.0zinc finger protein ZAT9
TrEMBLA0A151TLJ60.0A0A151TLJ6_CAJCA; Zinc finger protein 1
STRINGGLYMA09G36450.21e-130(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF1538968
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G60580.17e-31C2H2-like zinc finger protein