PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_20569
Common NameKK1_021184
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family TCP
Protein Properties Length: 334aa    MW: 35549.1 Da    PI: 10.4321
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_20569genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP119.73.6e-37551602109
            TCP   2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.eaesssssasnsssgkaaksaak 96 
                    + k+ +++++hTkv+gR+RR+R++a+caar+F+L++eLG+++d++ti WLl+ a+pai+++tgt++ +a ++  +++ +  +  +s ++  +++++
  C.cajan_20569  55 TQKRASTKDRHTKVEGRGRRIRMPATCAARIFQLTRELGHKSDGETIRWLLEHAEPAIIAATGTGTVPAIAMsVNGTLKIPT--PSPSNPDPEDPP 148
                    6799************************************************************888885552222222222..222233333332 PP

            TCP  97 skksqksaasaln 109
                    ++k++k++a +++
  C.cajan_20569 149 ERKKRKRPA-NSA 160
                    222222222.122 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF036345.4E-3160173IPR005333Transcription factor, TCP
PROSITE profilePS5136927.14161115IPR017887Transcription factor TCP subgroup
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0008361Biological Processregulation of cell size
GO:0048364Biological Processroot development
GO:1900056Biological Processnegative regulation of leaf senescence
GO:0005634Cellular Componentnucleus
Sequence ? help Back to Top
Protein Sequence    Length: 334 aa     Download sequence    Send to blast
MADEASRDVD LRLGEPKGPK QEPDTEEASG SAIRVMPVAV HVPAGMSKAL AQAQTQKRAS  60
TKDRHTKVEG RGRRIRMPAT CAARIFQLTR ELGHKSDGET IRWLLEHAEP AIIAATGTGT  120
VPAIAMSVNG TLKIPTPSPS NPDPEDPPER KKRKRPANSA YVDVNDAAVS LSAGLATSNN  180
QHATTTTTTT TSVPQHNVIP LPQGMVPVWA IPSNAVVPTA GAFFVVPQTP SFQHQPQFFT  240
IARPISAFVS SMVTPIQLQS TSTSSTIDNS NTSSTAPSSK SPARAAVMTP ATASATTTTT  300
TATTTTTTQM LRDFSLKIYD KQELQFMSRA SSKH
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1148155ERKKRKRP
2149154RKKRKR
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00638PBMTransfer from Lj0g3v0004489Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_20569
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020213077.10.0transcription factor TCP9
SwissprotO646477e-87TCP9_ARATH; Transcription factor TCP9
TrEMBLA0A151UCI00.0A0A151UCI0_CAJCA; Transcription factor TCP9
STRINGGLYMA03G02090.11e-176(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF21183086
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G45680.14e-77TCP family protein