PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_20486
Common NameKK1_021099
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family HD-ZIP
Protein Properties Length: 848aa    MW: 93417.7 Da    PI: 6.74
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_20486genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox59.74.6e-192279457
                   -SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
       Homeobox  4 RttftkeqleeLeelFeknrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57
                     ++t+eq+e+Le++++++++ps ++r++L +++    +++ +q+kvWFqNrR +ek+
  C.cajan_20486 22 YVRYTPEQVEALERVYAECPKPSSSRRQQLIRECpilaNIEPKQIKVWFQNRRCREKQ 79
                   6789****************************************************97 PP
2bZIP_1201.5e-06731151860
                    HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
         bZIP_1  18 rrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklk 60 
                    rr+R++ ++e  +L++   +L+a Nk L +e+++l+k+v++l 
  C.cajan_20486  73 RRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLV 115
                    9***************************************985 PP
3START173.31.5e-541693772205
                    HHHHHHHHHHHHHHHC-TT-EEEEEXCCTTEEEEEEESSS.SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-SEEEEEEEECTT..EEEEEEE CS
          START   2 laeeaaqelvkkalaeepgWvkssesengdevlqkfeeskvdsgealrasgvvdmvlallveellddkeqWdetlakaetlevissg..galqlmv 95 
                    +a+e+++e+++ka+ ++ +Wv++  +++g++++ +++ s+++sg a+ra+g+v  ++   v+e+l+d++ W ++++   +l v+ +g  g+++lm+
  C.cajan_20486 169 IAQETLAEFLSKATGTAVNWVQMIGMKPGPDSIGIVAVSRNCSGVAARACGLVSLEPS-KVAEILKDRPSWYRDCRCLNVLSVVPTGngGTIELMY 263
                    68899*****************************************************.8888888888*************************** PP

                    EXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--....-TTSEE-EESSEEEEEEEECTCEEEEEEEE-EE--SSXXHHHHHHHHHH CS
          START  96 aelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppe...sssvvRaellpSgiliepksnghskvtwvehvdlkgrlphwllrslvks 187
                    ++++a+++l++ Rdf+++Ry+ +l++g++vi+++S++s +  p+    s++vRae+lpSg+li+++++g+s +++v+hvdl+ ++++++lr+l++s
  C.cajan_20486 264 MQTYAPTTLAAaRDFWTLRYTTSLEDGSLVICERSLTSSTGGPTgppASNLVRAEMLPSGYLIRSCEGGGSIIHIVDHVDLDVWSVPEVLRPLYES 359
                    ***************************************99999999************************************************* PP

                    HHHHHHHHHHHHTXXXXX CS
          START 188 glaegaktwvatlqrqce 205
                    + + ++k ++a+l++ ++
  C.cajan_20486 360 SKFLAQKLTTAALRHVRQ 377
                    *************98765 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003891.6E-161884IPR001356Homeobox domain
CDDcd000863.58E-172181No hitNo description
SuperFamilySSF466899.84E-172183IPR009057Homeodomain-like
PfamPF000461.1E-162279IPR001356Homeobox domain
Gene3DG3DSA:1.10.10.606.2E-192379IPR009057Homeodomain-like
PROSITE profilePS5007115.4352480IPR001356Homeobox domain
CDDcd146861.79E-673112No hitNo description
PROSITE profilePS5084825.118159360IPR002913START domain
CDDcd088755.57E-69163379No hitNo description
Gene3DG3DSA:3.30.530.205.1E-21167351IPR023393START-like domain
SMARTSM002341.4E-51168378IPR002913START domain
PfamPF018527.0E-52169377IPR002913START domain
SuperFamilySSF559614.81E-36169378No hitNo description
PfamPF086701.2E-47703847IPR013978MEKHLA
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009855Biological Processdetermination of bilateral symmetry
GO:0009944Biological Processpolarity specification of adaxial/abaxial axis
GO:0010072Biological Processprimary shoot apical meristem specification
GO:0080060Biological Processintegument development
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0008289Molecular Functionlipid binding
Sequence ? help Back to Top
Protein Sequence    Length: 848 aa     Download sequence    Send to blast
MALCMQRDSA SNKHMHMDCG KYVRYTPEQV EALERVYAEC PKPSSSRRQQ LIRECPILAN  60
IEPKQIKVWF QNRRCREKQR KEASRLQTVN RKLTAMNKLL MEENDRLQKQ VSQLVYDNGY  120
MKQQIHTASA TTTDNSCESV VLSGQHQQKN PKTQHPQWDA NNPAGLLAIA QETLAEFLSK  180
ATGTAVNWVQ MIGMKPGPDS IGIVAVSRNC SGVAARACGL VSLEPSKVAE ILKDRPSWYR  240
DCRCLNVLSV VPTGNGGTIE LMYMQTYAPT TLAAARDFWT LRYTTSLEDG SLVICERSLT  300
SSTGGPTGPP ASNLVRAEML PSGYLIRSCE GGGSIIHIVD HVDLDVWSVP EVLRPLYESS  360
KFLAQKLTTA ALRHVRQIAH ESSGEVHYGG GRQPAVLRTF SQRLCRGFND AVNGFSDDGW  420
SLMGNDGVED VTIAINSSPN KFFGSHYNAS MLPAFGGGVL CAKASMLLQN VPPALLVRFL  480
REHRSEWADY GVDAYSSACL KASPYAVPCA RPSGFPSSQV ILPLAHTIEH EEFLEVVRIE  540
GHAFPPDDVA LACDMYLLQL CSGVDENAIG ACAQLVFAPI DESFADDALL LPSGFRIIPL  600
DPKTDGLAST RTLDLASTME IGSSNVRPAG ESDLNDYNLR SVLTIAFQFT FENHLRDNVA  660
VMARQYVRNV VRSVQRVAMA IAPSRLGAQS GPKSIPGPPE ALTLARWICR SYRLHTCTEL  720
FRVESTSGDA ILKQLWHHSD AILCCSIKTN ASPVFTFANQ AGLDMLETTL VALQDIVLDK  780
VLDEAGRKVL CIEFSKIMQQ GFAYLPAGIC VSSMNRPVSY EQAIAWKVMD DDDSNHCLAF  840
VFMNWSFV
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription factor. {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_20486
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020215009.10.0homeobox-leucine zipper protein ATHB-14
SwissprotQ6AST10.0HOX32_ORYSJ; Homeobox-leucine zipper protein HOX32
TrEMBLA0A151UC570.0A0A151UC57_CAJCA; Homeobox-leucine zipper protein HOX32
STRINGGLYMA08G13110.10.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF51763353
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G34710.10.0HD-ZIP family protein
Publications ? help Back to Top
  1. Kikuchi S, et al.
    Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice.
    Science, 2003. 301(5631): p. 376-9
    [PMID:12869764]
  2. Itoh J,Hibara K,Sato Y,Nagato Y
    Developmental role and auxin responsiveness of Class III homeodomain leucine zipper gene family members in rice.
    Plant Physiol., 2008. 147(4): p. 1960-75
    [PMID:18567825]
  3. Li YY, et al.
    Overexpression of OsHox32 Results in Pleiotropic Effects on Plant Type Architecture and Leaf Development in Rice.
    Rice (N Y), 2016. 9(1): p. 46
    [PMID:27624698]