PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_19455
Common NameKK1_020024
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family bZIP
Protein Properties Length: 349aa    MW: 39452.9 Da    PI: 6.6406
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_19455genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_133.96.7e-116397337
                   XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
         bZIP_1  3 elkrerrkqkNReAArrsRqRKkaeieeLeekvke 37
                    +k +rr+++NReAAr+sR+RKka++++Le    +
  C.cajan_19455 63 TDKIQRRLAQNREAARKSRLRKKAYVQQLESSRLK 97
                   7899*************************975444 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1707.7E-856107No hitNo description
SMARTSM003389.2E-761121IPR004827Basic-leucine zipper domain
PfamPF001709.2E-86399IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.09463107IPR004827Basic-leucine zipper domain
CDDcd147085.84E-2265117No hitNo description
SuperFamilySSF579593.73E-765107No hitNo description
PROSITE patternPS0003606883IPR004827Basic-leucine zipper domain
PfamPF141441.8E-32151225IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009409Biological Processresponse to cold
GO:0042742Biological Processdefense response to bacterium
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 349 aa     Download sequence    Send to blast
MSVYDPIHQI SMWGEGFKSN GNLSASVPLI DEPDMKLDSQ SEDASHGILG EPNKYDQEAN  60
KPTDKIQRRL AQNREAARKS RLRKKAYVQQ LESSRLKLMQ LEQELERARQ QGMYIGGGLD  120
SNHLGFAGSV NSGITTFETE YGHWVNEQNR QITELRSALN AHIGDMELRI LVDGMMSHYA  180
EIFRMKSAAA KADVFYVMSG MWKTTAERFF LWIGGFRPSE LLKVLGPLIE PLTEQQRLDI  240
YTLGQSCQQA EDALSQGMDK LRQLLADSVA AGQFMEGTYI PQMTSAMENL EALVSFVNQA  300
DHLRQGTLQQ MSRILTIRQA ARCLLALGEY FQRLRALSSL WSNRPREPA
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator that binds specifically to the DNA sequence 5'-TGACG-3'. Recognizes ocs elements like the as-1 motif of the cauliflower mosaic virus 35S promoter. Binding to the as-1-like cis elements mediate auxin- and salicylic acid-inducible transcription. May be involved in the induction of the systemic acquired resistance (SAR) via its interaction with NPR1. Could also bind to the Hex-motif (5'-TGACGTGG-3') another cis-acting element found in plant histone promoters.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00502DAPTransfer from AT5G10030Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_19455
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankSOYSTGA0.0L28005.1 Glycine max TGACG-motif binding protein (STGA1) mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020216818.10.0transcription factor TGA4
RefseqXP_020216823.10.0transcription factor TGA4
RefseqXP_020216828.10.0transcription factor TGA4
RefseqXP_020216845.10.0transcription factor TGA4
RefseqXP_020216851.10.0transcription factor TGA4
RefseqXP_029125826.10.0transcription factor TGA4
SwissprotQ391621e-178TGA4_ARATH; Transcription factor TGA4
TrEMBLA0A151U9420.0A0A151U942_CAJCA; Transcription factor TGA4
STRINGGLYMA18G02430.70.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF109634104
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G10030.21e-171TGACG motif-binding factor 4
Publications ? help Back to Top
  1. Duarte JM, et al.
    Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis.
    Mol. Biol. Evol., 2006. 23(2): p. 469-78
    [PMID:16280546]
  2. Canales J,Contreras-López O,Álvarez JM,Gutiérrez RA
    Nitrate induction of root hair density is mediated by TGA1/TGA4 and CPC transcription factors in Arabidopsis thaliana.
    Plant J., 2017. 92(2): p. 305-316
    [PMID:28771873]