PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_19423
Common NameKK1_019990
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family C2H2
Protein Properties Length: 306aa    MW: 34403.7 Da    PI: 6.8475
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_19423genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H222.53.1e-07143164223
                    EETTTTEEESSHHHHHHHHHHT CS
        zf-C2H2   2 kCpdCgksFsrksnLkrHirtH 23 
                     C++Cgk F+r  nL+ H+r H
  C.cajan_19423 143 FCEICGKGFRRDANLRMHMRAH 164
                    6*******************99 PP
2zf-C2H210.70.0017191214123
                    EEETTTT.EEESSHHHHHHHHHHT CS
        zf-C2H2   1 ykCpdCg.ksFsrksnLkrHirtH 23 
                    y+C+ C  k+Fs   +L++H + +
  C.cajan_19423 191 YTCELCRtKRFSVLADLRSHVKHC 214
                    9*******************9976 PP
3zf-C2H212.30.00052222237520
                    TTTEEESSHHHHHHHH CS
        zf-C2H2   5 dCgksFsrksnLkrHi 20 
                     Cg++Fsrk+ L +H 
  C.cajan_19423 222 TCGTTFSRKDKLFSHV 237
                    6**************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF576671.8E-6139165No hitNo description
SMARTSM003550.0017142164IPR015880Zinc finger, C2H2-like
PROSITE profilePS5015712.321142169IPR007087Zinc finger, C2H2
Gene3DG3DSA:3.30.160.601.3E-6142169IPR013087Zinc finger C2H2-type/integrase DNA-binding domain
PfamPF128740.0048143162No hitNo description
PROSITE patternPS000280144164IPR007087Zinc finger, C2H2
SMARTSM0035513191213IPR015880Zinc finger, C2H2-like
Gene3DG3DSA:3.30.160.608.7E-4213238IPR013087Zinc finger C2H2-type/integrase DNA-binding domain
SMARTSM00355250219243IPR015880Zinc finger, C2H2-like
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0090502Biological ProcessRNA phosphodiester bond hydrolysis, endonucleolytic
GO:0003676Molecular Functionnucleic acid binding
GO:0004526Molecular Functionribonuclease P activity
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 306 aa     Download sequence    Send to blast
MSNPNSNTNE DPTPTIHSGD PNTTADPQVP LRNLSLLRTK MDSLHHFLSQ SINTSAPLTV  60
HQIATVSNHI VNAIHQTIVN AAAIVSYSRN STAAVAPSYP KKLNADKHKL EHPEDDDAAE  120
AFDGDFEIVE LDAVELLAEH IHFCEICGKG FRRDANLRMH MRAHGERRFR SLRSVACVKN  180
HFKRSHCPKM YTCELCRTKR FSVLADLRSH VKHCGEDRWK CTCGTTFSRK DKLFSHVALF  240
EGHAPALACD KGKQVVDDHH RMGISESDEL GNRFEVEELP EGFFQDFGSI DDYCLREVLG  300
FPSNLT
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_19423
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020201817.10.0protein SENSITIVE TO PROTON RHIZOTOXICITY 1
TrEMBLA0A151U8X60.0A0A151U8X6_CAJCA; Protein SENSITIVE TO PROTON RHIZOTOXICITY 1
STRINGXP_007163652.11e-133(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF68553150
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G34370.32e-53C2H2 family protein