PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

C.cajan_18719

Common Name

KK1_019265

Organism

Cajanus cajan

Taxonomic ID

3821

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus

Family

Dof

Protein Properties

Length: 501aa MW: 54438.1 Da PI: 6.2008

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
C.cajan_18719	genome	IIPG	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	126.2	1e-39	137	197	2	62
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 ++k+l+cprC+s++tkfCyynny+++qPr+fCk+C+ryWt+GG++rnvPvG+grrknk+s C.cajan_18719 137 PDKILPCPRCNSMDTKFCYYNNYNVNQPRHFCKNCQRYWTAGGTMRNVPVGAGRRKNKNSA 197 7899******************************************************976 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
ProDom	PD007478	8.0E-31	134	194	IPR003851	Zinc finger, Dof-type
Pfam	PF02701	3.9E-32	139	195	IPR003851	Zinc finger, Dof-type
PROSITE profile	PS50884	28.975	141	195	IPR003851	Zinc finger, Dof-type
PROSITE pattern	PS01361	0	143	179	IPR003851	Zinc finger, Dof-type

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 501 aa Download sequence Send to blast
MSEAKDPAIK LFGKTIPVPE IPAEAPALSS GDVVDDSAEQ SHASSTNSSR ESRTNRDAPE 60 VDLDKDTLGE KPTDNKKEDG APTQSSEEVT NPDAASGTCE ESITLSTERE ATPLKTSKTE 120 EEQGETSNSQ DKNLKKPDKI LPCPRCNSMD TKFCYYNNYN VNQPRHFCKN CQRYWTAGGT 180 MRNVPVGAGR RKNKNSASHY RQITVSEAAI QNPRTDLPNG AYHPSLKCNG TVLTFGTDTP 240 LCESMASVLN LADKTVHNYT RNGFHKPEEL RISVPLASGE KGDDQSNKSS ITSTKSMEGT 300 STNGPQEQAM QNIQNFPQVP FFSGTPWPIP WNPVQWSSPV PPPAFCPPGF TVPFYPAAAY 360 WGCAVPGAWN IPWLAQPSSP KVANPNSGPN SPTLGKHSRE DNILKPNESG GEDEHSKENN 420 KEKSLWVPKT LRIDDSGEAA KSSLWTTLGI KNDKADSIPG GGLFKAFPSK NDEKNHSVQA 480 SPVLQANPAA LSRSLNFHET S

Sequence ? help Back to Top

Protein Sequence Length: 501 aa Download sequence Send to blast

MSEAKDPAIK LFGKTIPVPE IPAEAPALSS GDVVDDSAEQ SHASSTNSSR ESRTNRDAPE  60
VDLDKDTLGE KPTDNKKEDG APTQSSEEVT NPDAASGTCE ESITLSTERE ATPLKTSKTE  120
EEQGETSNSQ DKNLKKPDKI LPCPRCNSMD TKFCYYNNYN VNQPRHFCKN CQRYWTAGGT  180
MRNVPVGAGR RKNKNSASHY RQITVSEAAI QNPRTDLPNG AYHPSLKCNG TVLTFGTDTP  240
LCESMASVLN LADKTVHNYT RNGFHKPEEL RISVPLASGE KGDDQSNKSS ITSTKSMEGT  300
STNGPQEQAM QNIQNFPQVP FFSGTPWPIP WNPVQWSSPV PPPAFCPPGF TVPFYPAAAY  360
WGCAVPGAWN IPWLAQPSSP KVANPNSGPN SPTLGKHSRE DNILKPNESG GEDEHSKENN  420
KEKSLWVPKT LRIDDSGEAA KSSLWTTLGI KNDKADSIPG GGLFKAFPSK NDEKNHSVQA  480
SPVLQANPAA LSRSLNFHET S

Binding Motif ? help Back to Top
Motif ID	Method	Source	Motif file
MP00046	PBM	Transfer from AT5G39660	Download

Cis-element ? help Back to Top
Source	Link
PlantRegMap	C.cajan_18719

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	Retrieve

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_020220035.1	0.0	cyclic dof factor 2 isoform X1
Refseq	XP_020220036.1	0.0	cyclic dof factor 2 isoform X1
TrEMBL	A0A151TC81	0.0	A0A151TC81_CAJCA; Dof zinc finger protein DOF5.2
STRING	GLYMA18G49520.1	0.0	(Glycine max)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF625	34	147

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G39660.2	1e-113	cycling DOF factor 2