PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_18284
Common NameKK1_018818
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family MYB_related
Protein Properties Length: 505aa    MW: 57241.7 Da    PI: 7.4449
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_18284genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding25.72.7e-08400449147
                      TSSS-HHHHHHHHHHHHHTTTT....-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGgg....tWktIartmgkgRtlkqcksrwqky 47 
                      rg+WT++E+++++d+vk  +       W+   +t++  +++++++s+++++
    C.cajan_18284 400 RGSWTEQEEKKFIDVVKSNPASldkcFWDHLFKTFP-MKSREDLVSYYFNV 449
                      89******************99**************.99*********996 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5101117.188164IPR001606ARID DNA-binding domain
SMARTSM005010.0015265IPR001606ARID DNA-binding domain
SuperFamilySSF467741.14E-13368IPR001606ARID DNA-binding domain
Gene3DG3DSA:1.10.150.609.4E-13369IPR001606ARID DNA-binding domain
PfamPF013881.9E-7358IPR001606ARID DNA-binding domain
PROSITE profilePS511568.89300424IPR000949ELM2 domain
SMARTSM011891.2E-6302354IPR000949ELM2 domain
PfamPF002491.0E-5400449IPR001005SANT/Myb domain
CDDcd001670.00158402450No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0010628Biological Processpositive regulation of gene expression
GO:0016575Biological Processhistone deacetylation
GO:0048235Biological Processpollen sperm cell differentiation
GO:0000118Cellular Componenthistone deacetylase complex
GO:0048555Cellular Componentgenerative cell nucleus
GO:0048556Cellular Componentmicrosporocyte nucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 505 aa     Download sequence    Send to blast
MSNEEPLDLY KLFMVVKEKG GYDAVCKNRL WDLVGEEYGL GVKVGSSVEL VYSKHLSAVE  60
TCLKNAADDS SGDESVKVCD YLDGKKSFNT EMDILEVSGE GKRVTIAASD AECDMPKLFD  120
GSKSCDNDDD DNGNDVLILD PSSVDKESFG RKRKRELKSE MLSWVTSIAK NPCDPAVGSM  180
PEKSKWKSYT SQEIWKQALL FREAVFLKKD FQTITEKLSW QGQKMHPSMY DDRVGAVYSL  240
RQRLKCDKRH LSGNSKSDGV SSASSGGSEK TPSPHVEDCP EKHLLDSCTA RSSRDKCVRV  300
HIPVGPNHQA KVPKWTDMSY ESDSKWLGTQ IWPLEKVNSK LLLVERDPIG KGRQDSCGCQ  360
VQGSVECVRF HIAKKRSKVK LELGEAFYLW NLHKVGEEVR GSWTEQEEKK FIDVVKSNPA  420
SLDKCFWDHL FKTFPMKSRE DLVSYYFNVF LLQRRAYQNR HTPDNIDSDD DESEFTPLRK  480
VFGHQTQKSR SFTLLSPKKA TDKKA
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_18284
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020219574.10.0AT-rich interactive domain-containing protein 1
RefseqXP_020219575.10.0AT-rich interactive domain-containing protein 1
RefseqXP_020219576.10.0AT-rich interactive domain-containing protein 1
RefseqXP_020219577.10.0AT-rich interactive domain-containing protein 1
RefseqXP_029127993.10.0AT-rich interactive domain-containing protein 1
RefseqXP_029127994.10.0AT-rich interactive domain-containing protein 1
TrEMBLA0A151TB060.0A0A151TB06_CAJCA; Uncharacterized protein
STRINGGLYMA09G39361.10.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF43731724