PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_17965
Common NameKK1_018496
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family Dof
Protein Properties Length: 415aa    MW: 44959.4 Da    PI: 7.3115
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_17965genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof125.41.8e-3972131261
         zf-Dof   2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61 
                    ++k+l+cprC+s +tkfCy+nny+++qPr+fCk+C+ryWt+GG++rnvP+G+grrknk+ 
  C.cajan_17965  72 PDKILQCPRCNSLDTKFCYFNNYNVNQPRHFCKNCQRYWTAGGTMRNVPIGAGRRKNKHL 131
                    7899******************************************************86 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
ProDomPD0074785.0E-2969129IPR003851Zinc finger, Dof-type
PfamPF027013.0E-3274130IPR003851Zinc finger, Dof-type
PROSITE profilePS5088428.42576130IPR003851Zinc finger, Dof-type
PROSITE patternPS01361078114IPR003851Zinc finger, Dof-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 415 aa     Download sequence    Send to blast
MSQTDKDPGI RLFGRKIPVP ECQIPASFGP MDACSSIKKT EAEIPSDCEE NSEQQENSSD  60
LRDNQDKVLK KPDKILQCPR CNSLDTKFCY FNNYNVNQPR HFCKNCQRYW TAGGTMRNVP  120
IGAGRRKNKH LASQYRHIIV TSDGIPTSRL ETTDSSGHQQ QHITSLESSV PFISSTDNST  180
VLKFGPDTPL CESMDSMLNL RDHKRCVDAS SLTCVEYGGE PSLCGSSVTN NVHQSSAPMC  240
NSPYNTGPAS MQWCPTPMVA IPGMCPPSIP LQLVPPSYWG GTPLWNGGTG AVSIGSNACL  300
SPSSSTSNSC CSGNVSPTLG KHTRDKDNAF ADEEKSEKCV LVPKTIRIDA TNDASKSPIR  360
AALAIKPDQL QSVSKGDVLK KNEPKEGNDR VSGASQILEA NPAAISRAHA FQESM
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_17965
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT0939661e-166BT093966.1 Soybean clone JCVI-FLGm-18A13 unknown mRNA.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020219127.10.0cyclic dof factor 3
RefseqXP_020219128.10.0cyclic dof factor 3
TrEMBLA0A151TA430.0A0A151TA43_CAJCA; Dof zinc finger protein DOF5.2
STRINGGLYMA19G29610.20.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF35023165
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G39660.23e-63cycling DOF factor 2