PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_17753
Common NameKK1_018276
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family GRF
Protein Properties Length: 382aa    MW: 43519.1 Da    PI: 8.4464
Description GRF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_17753genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRC78.94.8e-2578122145
            WRC   1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkskee 45 
                    d+epgrCrRtDGKkWRCs+++++++k+CErH+hrgr+rsrk++e 
  C.cajan_17753  78 DPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGRNRSRKPVEV 122
                    79****************************************985 PP

2QLQ55.12.3e-191247136
            QLQ  1 saFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiq 36
                   s+FT++Q+q+L++Q+l++Ky++ + P+Pp+L+  i+
  C.cajan_17753 12 SPFTPTQWQELEQQALVFKYMVTGTPIPPDLVYSIK 47
                   89*****************************99887 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM009512.1E-111248IPR014978Glutamine-Leucine-Glutamine, QLQ
PfamPF088802.9E-141346IPR014978Glutamine-Leucine-Glutamine, QLQ
PROSITE profilePS5166621.0441348IPR014978Glutamine-Leucine-Glutamine, QLQ
PROSITE profilePS5166725.32578122IPR014977WRC domain
PfamPF088793.6E-2179121IPR014977WRC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009739Biological Processresponse to gibberellin
GO:0030912Biological Processresponse to deep water
GO:0048366Biological Processleaf development
GO:0005634Cellular Componentnucleus
GO:0016021Cellular Componentintegral component of membrane
GO:0005524Molecular FunctionATP binding
Sequence ? help Back to Top
Protein Sequence    Length: 382 aa     Download sequence    Send to blast
MMSASASARN RSPFTPTQWQ ELEQQALVFK YMVTGTPIPP DLVYSIKRSL DSSISSRLFP  60
HHPIGWGCFE MGFGRKVDPE PGRCRRTDGK KWRCSKEAYP DSKYCERHMH RGRNRSRKPV  120
EVSSATSTAT NTSQTIPSYS RNLSLNNNNS NPNITSPSSF PFSPLPSSIS CESQPFPQSY  180
QNSSLNPFFY SQSNSSRPPD TDFPPQDATT HQLFMDSGSY SHDEKDYSRH VHGTREDVDE  240
RAFFPEASGS ARSYTDSYQQ LSMSSYKSYT NTNFQNMNDN TPRQQEQQHC FVLGTDFKST  300
RPSKEKEAET SQRPLHRFFG EWPPKNTTDS WLDLASNSRI PTGDDPAYSS SSLIIIPFLI  360
FQFMLTYNKI ICTYVVSFIL GR
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_17753
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150421e-172AP015042.1 Vigna angularis var. angularis DNA, chromosome 9, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020219153.10.0growth-regulating factor 5 isoform X1
TrEMBLA0A151T9H20.0A0A151T9H2_CAJCA; Uncharacterized protein
STRINGXP_007135443.10.0(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF97443137
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G13960.13e-56growth-regulating factor 5