PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_17734
Common NameKK1_018257
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family MYB_related
Protein Properties Length: 647aa    MW: 71451.7 Da    PI: 6.2877
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_17734genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding24.18.4e-08531579348
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmg...kgRtlkqcksrwqkyl 48 
                      +WT  E  +lv++v + G g+W+ I r        Rt  ++k++w+++l
    C.cajan_17734 531 AWTLVEVIKLVEGVSRCGAGRWSEIKRLSFssySYRTSVDLKDKWRNLL 579
                      7**************************99999*99************96 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129414.025524583IPR017930Myb domain
SuperFamilySSF466891.22E-14526586IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.609.9E-11526581IPR009057Homeodomain-like
SMARTSM007176.2E-8528581IPR001005SANT/Myb domain
CDDcd116607.17E-19530580No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009651Biological Processresponse to salt stress
GO:0046686Biological Processresponse to cadmium ion
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 647 aa     Download sequence    Send to blast
METVVGIEDN DDGKFEDSGV DRSSSALSSP KQISNPIVYK LVRVEGDGRL VPATDDEVME  60
VGDFLECENS EMHVVADTGQ SLECISIERS SSGNLRLECS EGTAEADLGK LNAKLQYIEQ  120
ILEKVKEEEK QRVSCGSPVH SHVNIDSQCS ADKFPVVDGK VQSENQETPS IASSLNYTHS  180
NQSGSTDQCS RPSEGVIESG SSASAVYSNL KPDLSMSDGE ICLDKLSIRE LHELFKVTFG  240
RETTVKDKQW LKRRIAMSLT NSCDVSATTF IVKDNKIVRK FEDNSGNMNA ASLITSETMT  300
EEEDVNFKDS SAVKAREIDD NQVVSETKLR NHSMGYGLED ENHQTDQRAA KRIRKPTKRY  360
IEELSENESR EHSPRLLISN RTAGHGHVSP TSYVRPAARN AFSELRTYVT RSDSLGGSDV  420
QIPCVSRVRR SRPRKDITSL MKFHPIGMGE AAKLSNKLLE HSSDADSEIP DNVLKSSSEP  480
VKEKQCPETG TVELRPELRP KRADPFSHTS DDDIVTVPTA KGGMRRKHHR AWTLVEVIKL  540
VEGVSRCGAG RWSEIKRLSF SSYSYRTSVD LKDKWRNLLK ASSALTPSPA DDGINSRKHG  600
TAPIPEKILL RVRELAEMNS QVPPSYSSNK FAAGAGSLHG GDRSGYL
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1428434RRSRPRK
2428435RRSRPRKD
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_17734
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankFJ5607070.0FJ560707.1 Glycine max transcription factor MYB884 mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020218757.10.0uncharacterized protein LOC109801989 isoform X1
TrEMBLA0A151T9F60.0A0A151T9F6_CAJCA; Telomere-binding protein 1
STRINGXP_007135460.10.0(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF78493040
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G72650.11e-115TRF-like 6