PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_17254
Common NameKK1_017765
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family TCP
Protein Properties Length: 422aa    MW: 45574.1 Da    PI: 7.5266
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_17254genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP111.41.3e-34371822115
            TCP   2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.eaesssssasnsssg........ 88 
                    a+ k++++++hTkv+gR+RR+R++a+caar+F+L++eLG+++d++tieWLlqqa+pai ++tgt++++a+++  ++s +ss+s+ s++        
  C.cajan_17254  37 AAPKRSTKDRHTKVEGRGRRIRMPATCAARVFQLTRELGHKSDGETIEWLLQQAEPAIGAATGTGTIPANFSsLTVSLRSSGSTLSAPpsksapht 132
                    56799****************************************************************999888888888886666677778899 PP

            TCP  89 ..............................kaaksaakskksqksaasalnlakesr 115
                                                  +++ +++++++         +++++++
  C.cajan_17254 133 fhgalalahhpyeeafqqhtallgfhphhhHHQHQHQHPQQH-------PHPHQHQH 182
                    998887777777777777777776555432111111111111.......11111111 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF036342.7E-4142219IPR005333Transcription factor, TCP
PROSITE profilePS5136927.594397IPR017887Transcription factor TCP subgroup
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0001047Molecular Functioncore promoter binding
Sequence ? help Back to Top
Protein Sequence    Length: 422 aa     Download sequence    Send to blast
MELSDLQNNK QSSSNTAIAT RSDDSAKKTT QHLSTTAAPK RSTKDRHTKV EGRGRRIRMP  60
ATCAARVFQL TRELGHKSDG ETIEWLLQQA EPAIGAATGT GTIPANFSSL TVSLRSSGST  120
LSAPPSKSAP HTFHGALALA HHPYEEAFQQ HTALLGFHPH HHHHQHQHQH PQQHPHPHQH  180
QHQHQHQHPQ QQLLSADQIA EALPSGGDSG ESYLRKRYRE DLFKDDNINN QSQNESGDGS  240
SPKTPNLQLP KQQQTEAGPG LHRPASLLPA TAMWAVAPAP ASGPAGSTIW MLPVTAAASS  300
SSGAAASSAS ASASSETQMW PFTQSGFMPR FNLPGALEFQ GARAGSLQLG SMLMPPQPSQ  360
HLGLAMSDSN LGMLAALNAY TRAGFNINSD NHHMEHPHQH HHQHHHQPQP SESGEDAPNS  420
SQ
Functional Description ? help Back to Top
Source Description
UniProtCan specifically bind site II elements in the promoter region of PP438/PNM1. {ECO:0000269|PubMed:21297037}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_17254
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020221746.10.0transcription factor TCP8
SwissprotQ9C5181e-87TCP8_ARATH; Transcription factor TCP8
TrEMBLA0A151T8070.0A0A151T807_CAJCA; Transcription factor TCP8
STRINGXP_007148546.10.0(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF60773050
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G58100.16e-67TCP family protein
Publications ? help Back to Top
  1. Mazur MJ, et al.
    Arabidopsis TCP Transcription Factors Interact with the SUMO Conjugating Machinery in Nuclear Foci.
    Front Plant Sci, 2017. 8: p. 2043
    [PMID:29250092]