PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_16839
Common NameKK1_017337
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family G2-like
Protein Properties Length: 317aa    MW: 34530.3 Da    PI: 7.3757
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_16839genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like1062.1e-334296155
        G2-like  1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55
                   kprlrWt++LHerFv+av+qLGG+ kAtPk+i+++m+vkgLtl h+kSHLQkYRl
  C.cajan_16839 42 KPRLRWTQDLHERFVDAVTQLGGASKATPKAIMRTMNVKGLTLFHLKSHLQKYRL 96
                   79****************************************************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS512949.5693999IPR017930Myb domain
Gene3DG3DSA:1.10.10.605.6E-323997IPR009057Homeodomain-like
TIGRFAMsTIGR015577.9E-244297IPR006447Myb domain, plants
SuperFamilySSF466891.31E-164298IPR009057Homeodomain-like
PfamPF002492.1E-74495IPR001005SANT/Myb domain
PfamPF143792.2E-15140185IPR025756MYB-CC type transcription factor, LHEQLE-containing domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 317 aa     Download sequence    Send to blast
MYPRLIHPHD AIVPQEDMHA AASNLSHAHK GDPCLVLTAD PKPRLRWTQD LHERFVDAVT  60
QLGGASKATP KAIMRTMNVK GLTLFHLKSH LQKYRLGKQS GKDVGEGCKD GISGSYLLES  120
PGTDNSSPKL PTSDTNEGYE IKEALRAQME VQSKLHLQVE AEKHLQIRQD AERRYMAMLE  180
RACKMLADQF IGATVIDTDS QKFQGIGSKA PRGTLVDPLG FYSLPSAEVA GVNVPEEEIP  240
PTIPPQRADC STESCLTSHE SSGGLALEGS PGGGKRRMLG MDSMAAPLIW SEAKMRTQAI  300
NVVAQGNHPQ GITRYGM
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6j4k_A1e-184298258Protein PHOSPHATE STARVATION RESPONSE 1
6j4k_B1e-184298258Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_A1e-184298258Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_C1e-184298258Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_D1e-184298258Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_F1e-184298258Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_H1e-184298258Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_J1e-184298258Protein PHOSPHATE STARVATION RESPONSE 1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_16839
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT0936500.0BT093650.1 Soybean clone JCVI-FLGm-24E4 unknown mRNA.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020221205.10.0protein PHR1-LIKE 2 isoform X1
TrEMBLA0A151T6W50.0A0A151T6W5_CAJCA; Myb family transcription factor APL
STRINGXP_007147561.10.0(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF66183349
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G24120.11e-63G2-like family protein