PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_15679
Common NameKK1_016140
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family bHLH
Protein Properties Length: 343aa    MW: 37474.9 Da    PI: 5.4281
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_15679genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH11.90.000432082461255
                    HHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
            HLH  12 RRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                    R +++ +++  L +l+ +      +K + a++L +A+ YI+ Lq
  C.cajan_15679 208 RKEKLGDRITALHQLVSPF-----GKTDTASVLLEAIGYIRFLQ 246
                    6678889999999999998.....8******************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088811.35196245IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000836.43E-6206250No hitNo description
SuperFamilySSF474594.84E-10206256IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.102.9E-7210252IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 343 aa     Download sequence    Send to blast
MNRGVLQSSP VQQMMAGNPN NWWNINTPPP PPPPQPPQPS PPFFSTPSNF LTPYNPTSSL  60
PLPSWLDNNQ DLPESWSQLL MSGILVPEEE KGSMCQVESK KLENWEEQML SQAPSASIKQ  120
ESSVNSYVYG HGNEEFQAAK PTWSQIVPSS SPKSSVTSFS SSMLDFSNTD ARPPPPDPSS  180
ECNSSAAGGA FKKARVQPTT TQSTFKVRKE KLGDRITALH QLVSPFGKTD TASVLLEAIG  240
YIRFLQSQIE ALSLPYLGSG SGNMRHQQSV QGEKNCIFPE DPGQLVNENC LKRKAASEQD  300
SQEEPKKDLK SRGLCLVPVS CTLQVGSENG ADYWSHAFGG GFR
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_15679
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT0944730.0BT094473.1 Soybean clone JCVI-FLGm-24H22 unknown mRNA.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020220726.10.0transcription factor bHLH68 isoform X2
SwissprotQ8S3D11e-101BH068_ARATH; Transcription factor bHLH68
TrEMBLA0A151T3K80.0A0A151T3K8_CAJCA; Transcription factor bHLH68
STRINGGLYMA05G35610.10.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF12233379
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G29100.13e-86bHLH family protein
Publications ? help Back to Top
  1. Skinner MK,Rawls A,Wilson-Rawls J,Roalson EH
    Basic helix-loop-helix transcription factor gene family phylogenetics and nomenclature.
    Differentiation, 2010. 80(1): p. 1-8
    [PMID:20219281]
  2. Le Hir R, et al.
    AtbHLH68 transcription factor contributes to the regulation of ABA homeostasis and drought stress tolerance in Arabidopsis thaliana.
    Physiol Plant, 2017. 160(3): p. 312-327
    [PMID:28369972]
  3. Ezer D, et al.
    The G-Box Transcriptional Regulatory Code in Arabidopsis.
    Plant Physiol., 2017. 175(2): p. 628-640
    [PMID:28864470]