PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_14151
Common NameKK1_014577
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family HD-ZIP
Protein Properties Length: 247aa    MW: 28496.3 Da    PI: 4.7165
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_14151genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox59.26.6e-194293556
                   SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
       Homeobox  5 ttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56
                   ++f+++q++ Le++Fe ++ +  +++ +LA++lgL+ rqV +WFqN+Ra++k
  C.cajan_14151 42 RRFSDDQIKSLENMFETESRLEPRKKLQLARELGLQPRQVAIWFQNKRARWK 93
                   48*************************************************9 PP
2HD-ZIP_I/II118.24.5e-3841131393
    HD-ZIP_I/II   3 krrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelke 93 
                     rr+s++q+k+LE++Fe+e++Lep++K +lareLglqprqva+WFqn+RAR+k+kqlE+dy+ L+++y++l+++ e+L+ke+++L  +l++
  C.cajan_14151  41 TRRFSDDQIKSLENMFETESRLEPRKKLQLARELGLQPRQVAIWFQNKRARWKSKQLERDYTILQTNYNTLASRFEALRKEKQTLLIQLQK 131
                    79***********************************************************************************999886 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5007117.23595IPR001356Homeobox domain
SuperFamilySSF466891.46E-1737105IPR009057Homeodomain-like
SMARTSM003896.9E-163899IPR001356Homeobox domain
PfamPF000463.0E-164293IPR001356Homeobox domain
Gene3DG3DSA:1.10.10.606.6E-1942102IPR009057Homeodomain-like
CDDcd000861.05E-144296No hitNo description
PRINTSPR000311.0E-56675IPR000047Helix-turn-helix motif
PROSITE patternPS0002707093IPR017970Homeobox, conserved site
PRINTSPR000311.0E-57591IPR000047Helix-turn-helix motif
PfamPF021832.5E-1595137IPR003106Leucine zipper, homeobox-associated
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009414Biological Processresponse to water deprivation
GO:0009738Biological Processabscisic acid-activated signaling pathway
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 247 aa     Download sequence    Send to blast
MEYTYSAEAE TYTSSSTTPS TALRKKKNNN NNNNNNNNNN TRRFSDDQIK SLENMFETES  60
RLEPRKKLQL ARELGLQPRQ VAIWFQNKRA RWKSKQLERD YTILQTNYNT LASRFEALRK  120
EKQTLLIQLQ KLNHLMQKPL EPGEKCTQVE AANSVDSESE YGGTMKCEAE EKPSPSMERS  180
EHVFGVLSDD DTSIKVENFG LEDEPGLLNF AEHADGSLTS PEDWGAFESN DLLGQSTSDY  240
QWWDFWS
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription activator that may act as growth regulators in response to water deficit. {ECO:0000269|PubMed:15604708, ECO:0000269|PubMed:8771791}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00320DAPTransfer from AT2G46680Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_14151
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: By water deficit, by abscisic acid (ABA) and by salt stress. {ECO:0000269|PubMed:16055682, ECO:0000269|PubMed:8771791}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKT0311760.0KT031176.1 Glycine max clone HN_WYQ_5 homeodomain/HOMEOBOX transcription factor (Glyma16g02390.1) mRNA, partial cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020223175.10.0homeobox-leucine zipper protein ATHB-12 isoform X2
SwissprotP468975e-66ATHB7_ARATH; Homeobox-leucine zipper protein ATHB-7
TrEMBLA0A151SWH10.0A0A151SWH1_CAJCA; Homeobox-leucine zipper protein ATHB-7
STRINGGLYMA16G02390.11e-143(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF56353452
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46680.12e-64homeobox 7
Publications ? help Back to Top
  1. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]
  2. Zhou SF, et al.
    Membrane-associated transcription factor peptidase, site-2 protease, antagonizes ABA signaling in Arabidopsis.
    New Phytol., 2015. 208(1): p. 188-97
    [PMID:25919792]