PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

C.cajan_14036

Common Name

KK1_014459

Organism

Cajanus cajan

Taxonomic ID

3821

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus

Family

C2H2

Protein Properties

Length: 410aa MW: 46012.5 Da PI: 8.9576

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
C.cajan_14036	genome	IIPG	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	10.9	0.0015	358	377	3	23
ETTTTEEESSHHHHHHHHHHT CS zf-C2H2 3 CpdCgksFsrksnLkrHirtH 23 C+ CgksF ++ +++H++++ C.cajan_14036 358 CSQCGKSF-KPEKMHKHMKSC 377 ******.********98 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF06136	6.6E-39	13	294	IPR010369	Protein of unknown function DUF966

Sequence ? help Back to Top
Protein Sequence Length: 410 aa Download sequence Send to blast
MEARGGGEVR RLHIIYFLSH IGGRSDHPHL IRVLHLARNG VYLRDVKRWL GELRGKDLPE 60 AFAWSYKRRY KSGYVWQDLL DDDLITPISD NEYVLKGSQI HPTPFATTTP HDEKKTTVCD 120 IHAERKCPQV QVVEDKQQQP SLAEKPQIQP DPDLKTDTPT KGSSEISQDS LVFSSDRSSV 180 TDDDSSKVEE EKHLELTGKV GLNEIKQEKL ETSTLPSLYH NLLSKKGSRK DDQNKTNSPD 240 SSLSTVSSSS SQSSFTKTRS NSTRVSSVFR NWITCGTVET NDAALVLMNP AQKKFSKELD 300 NIPEIKARCF GTSWSTHHQK QQYGARKSFD GEETTGRRKK LGELINQTSS KPFGGPICSQ 360 CGKSFKPEKM HKHMKSCKGM KALGKSTTIV EESQLQTSST SSDTDYFLTN

Sequence ? help Back to Top

Protein Sequence Length: 410 aa Download sequence Send to blast

MEARGGGEVR RLHIIYFLSH IGGRSDHPHL IRVLHLARNG VYLRDVKRWL GELRGKDLPE  60
AFAWSYKRRY KSGYVWQDLL DDDLITPISD NEYVLKGSQI HPTPFATTTP HDEKKTTVCD  120
IHAERKCPQV QVVEDKQQQP SLAEKPQIQP DPDLKTDTPT KGSSEISQDS LVFSSDRSSV  180
TDDDSSKVEE EKHLELTGKV GLNEIKQEKL ETSTLPSLYH NLLSKKGSRK DDQNKTNSPD  240
SSLSTVSSSS SQSSFTKTRS NSTRVSSVFR NWITCGTVET NDAALVLMNP AQKKFSKELD  300
NIPEIKARCF GTSWSTHHQK QQYGARKSFD GEETTGRRKK LGELINQTSS KPFGGPICSQ  360
CGKSFKPEKM HKHMKSCKGM KALGKSTTIV EESQLQTSST SSDTDYFLTN

Cis-element ? help Back to Top
Source	Link
PlantRegMap	C.cajan_14036

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_020223927.1	0.0	protein UPSTREAM OF FLC isoform X1
Refseq	XP_020223928.1	0.0	protein UPSTREAM OF FLC isoform X1
Refseq	XP_020223930.1	0.0	protein UPSTREAM OF FLC isoform X3
Refseq	XP_020223931.1	0.0	protein UPSTREAM OF FLC isoform X3
Refseq	XP_029128783.1	0.0	protein UPSTREAM OF FLC isoform X1
TrEMBL	A0A151SW67	0.0	A0A151SW67_CAJCA; Uncharacterized protein
STRING	GLYMA08G16910.2	0.0	(Glycine max)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF8378	16	20