PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_13736
Common NameKK1_014158
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family HD-ZIP
Protein Properties Length: 767aa    MW: 83022 Da    PI: 5.954
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_13736genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox63.82.5e-2092147156
                    TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
       Homeobox   1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                    +++ +++t++q++e+e++F+++++p+ ++r+eL+++lgL+  qVk+WFqN+R+++k
  C.cajan_13736  92 KKRYHRHTQHQIQEMESFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMK 147
                    688999***********************************************999 PP
2START217.93.5e-682875071206
                    HHHHHHHHHHHHHHHHC-TT-EEEE....EXCCTTEEEEEEESSS......SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-S....EEEEEE CS
          START   1 elaeeaaqelvkkalaeepgWvkss....esengdevlqkfeeskv.....dsgealrasgvvdmvlallveellddkeqWdetla....kaetle 83 
                    ela +a++el+ +a+ +ep+W +s     + +n+de++++f+++ +     ++ ea+r+++v +m++++lve+l+d++ qW++ +     +a+tle
  C.cajan_13736 287 ELAVAAMEELIGMAQMGEPLWLTSLdgtaTVLNEDEYIRSFPRGIGpkpagFKCEASRETAVIIMNHVNLVEILMDVN-QWSTVFSgivsRAMTLE 381
                    57899********************999999************999********************************.***************** PP

                    EECTT......EEEEEEEEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--.-TTSEE-EESSEEEEEEEECTCEEEEEEEE-EE- CS
          START  84 vissg......galqlmvaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppesssvvRaellpSgiliepksnghskvtwvehvdl 172
                    v+s+g      galq+m+aelq++splvp R+++fvRy++q+g+g+w++vdvS+d+ ++ p    ++R++++pSg+li++++ng+skv+wvehv++
  C.cajan_13736 382 VLSTGvagnynGALQVMTAELQVPSPLVPtRESYFVRYCKQHGEGTWAVVDVSLDNLRPSP----SARSRRRPSGCLIQEMPNGYSKVIWVEHVEV 473
                    ***********************************************************99....5****************************** PP

                    -SSXXHHHHHHHHHHHHHHHHHHHHHHTXXXXXX CS
          START 173 kgrlphwllrslvksglaegaktwvatlqrqcek 206
                    ++r +h+l+++lv+sg+a+gak+w atl+rqce+
  C.cajan_13736 474 DDRGVHNLYKQLVSSGHAFGAKRWIATLDRQCER 507
                    ********************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.602.1E-2371147IPR009057Homeodomain-like
SuperFamilySSF466891.88E-1981149IPR009057Homeodomain-like
PROSITE profilePS5007116.95789149IPR001356Homeobox domain
SMARTSM003892.7E-1990153IPR001356Homeobox domain
PfamPF000466.1E-1892147IPR001356Homeobox domain
CDDcd000863.85E-1992150No hitNo description
PROSITE patternPS000270124147IPR017970Homeobox, conserved site
SuperFamilySSF559614.73E-34278509No hitNo description
PROSITE profilePS5084843.471278510IPR002913START domain
CDDcd088751.37E-128282506No hitNo description
SMARTSM002342.3E-61287507IPR002913START domain
PfamPF018523.6E-57288507IPR002913START domain
Gene3DG3DSA:3.30.530.202.7E-5381502IPR023393START-like domain
SuperFamilySSF559618.57E-25527758No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0008289Molecular Functionlipid binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 767 aa     Download sequence    Send to blast
MPAGIMIPAR NMPSMIGRNG NVGGFGLSSG LSLGQPNLME ASHQLLPLDM PQNSESDVPR  60
IREDDFDSAT KSGSENQEGA SGEDQDPRPN KKKRYHRHTQ HQIQEMESFF KECPHPDDKQ  120
RKELSRELGL EPLQVKFWFQ NKRTQMKTQH ERHENTQLRT ENEKLRADNM RFREALSNAS  180
CPNCGGPTAI GEMSFDEHHL RLENARLREE IDRISAIAAK YVGKPVVSYP LLSPNSSVPP  240
RPLELGIGGG FGGQAGGIGG DMYGGAAGDL LRSISGPTEA DKPIIIELAV AAMEELIGMA  300
QMGEPLWLTS LDGTATVLNE DEYIRSFPRG IGPKPAGFKC EASRETAVII MNHVNLVEIL  360
MDVNQWSTVF SGIVSRAMTL EVLSTGVAGN YNGALQVMTA ELQVPSPLVP TRESYFVRYC  420
KQHGEGTWAV VDVSLDNLRP SPSARSRRRP SGCLIQEMPN GYSKVIWVEH VEVDDRGVHN  480
LYKQLVSSGH AFGAKRWIAT LDRQCERLAS AMATNIPTVD VGVITNQDGR KSMLKLAERM  540
VISFCAGVSA STAHTWTTLS GTGADDVRVM TRKSVDDPGR PPGIVLSAAT SFWLPVSPKR  600
VFEFLRDENS RSEWDILSNG GVVQEMAHIA NGRDTGNCVS LLRVNSANSS QSNMLILQES  660
CADSTGSFVI YAPVDIVAMN VVLNGGDPDY VALLPSGFAI LPDGTTAHGG GIGDTGHGGS  720
LLTVAFQILV DSVPTAKLSL GSVATVNNLI ACTVERIKAA LSSEPVA
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription factor. {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_13736
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKT0311700.0KT031170.1 Glycine max clone HN_CCL_122 homeodomain/HOMEOBOX transcription factor (Glyma13g38430.1) mRNA, partial cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020223651.10.0homeobox-leucine zipper protein HDG2 isoform X2
SwissprotQ94C370.0HDG2_ARATH; Homeobox-leucine zipper protein HDG2
TrEMBLA0A151SVC00.0A0A151SVC0_CAJCA; Homeobox-leucine zipper protein HDG2
STRINGXP_007149968.10.0(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF15083499
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G05230.40.0homeodomain GLABROUS 2