PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

C.cajan_13618

Common Name

KK1_014034

Organism

Cajanus cajan

Taxonomic ID

3821

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus

Family

Dof

Protein Properties

Length: 265aa MW: 29525.8 Da PI: 8.4007

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
C.cajan_13618	genome	IIPG	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	126.1	1e-39	26	87	2	63
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkksss 63 +e+alkcprCdst tkfCyynnyslsqPryfCk+CrryWtkGG+lrnvPvGgg+rkn++sss C.cajan_13618 26 PEEALKCPRCDSTSTKFCYYNNYSLSQPRYFCKSCRRYWTKGGTLRNVPVGGGCRKNRRSSS 87 6899******************************************************9875 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
ProDom	PD007478	1.0E-27	14	79	IPR003851	Zinc finger, Dof-type
Pfam	PF02701	3.0E-33	28	84	IPR003851	Zinc finger, Dof-type
PROSITE profile	PS50884	29.339	30	84	IPR003851	Zinc finger, Dof-type
PROSITE pattern	PS01361	0	32	68	IPR003851	Zinc finger, Dof-type

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 265 aa Download sequence Send to blast
MSSESSMENM LGCSKAQQEK KPRPNPEEAL KCPRCDSTST KFCYYNNYSL SQPRYFCKSC 60 RRYWTKGGTL RNVPVGGGCR KNRRSSSSSK RAQDQNFTPN PNPLPHLSYD SNDFTLALAK 120 FQKQSSGQLG SFCDILGNSN MNHQPSSANP SFFDAIRTGF LETQNHLQNL YCVYGSGDMG 180 EVDNGNSGGD IMMPYDHVMS NAASQSVSVT SMKQELCTGR DQSERRVFGS FNGDTNYMGE 240 LDSGRAMSWN NFTSSWHGIL RSPLM

Cis-element ? help Back to Top
Source	Link
PlantRegMap	C.cajan_13618

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	DQ857261	7e-87	DQ857261.1 Glycine max Dof11 mRNA, complete cds.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_020224114.1	0.0	dof zinc finger protein DOF5.3
TrEMBL	A0A151SV18	0.0	A0A151SV18_CAJCA; Dof zinc finger protein DOF5.3
STRING	GLYMA13G40420.1	1e-134	(Glycine max)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF5026	30	51

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G60200.1	1e-35	TARGET OF MONOPTEROS 6