PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_13522
Common NameKK1_013937
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family GRAS
Protein Properties Length: 624aa    MW: 69955.8 Da    PI: 5.4714
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_13522genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS361.61.1e-1102566223374
           GRAS   3 elLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshlta 98 
                    +lL++cA+av+s d+++a++lL+++++++sp+gd +qRla+yf+++L+ rla    ++ + +p + ++   s++ l+a+klf+  sP+  +s+l++
  C.cajan_13522 256 TLLTQCAQAVASFDQRNANELLSQIRQHSSPHGDGLQRLAHYFANGLEIRLAA---GTPSYMPLEVAT---SADMLKAYKLFVTSSPLQMLSNLLT 345
                    69**************************************************9...444444555554...78*********************** PP

           GRAS  99 NqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrledlele 192
                     ++I   v++e+ vH+iDf++ +G+QWp+L + L++R++gpp+lRiTg++ p++g   +e++eetg+rL++++++ +vpfe+n  +a+++e+++le
  C.cajan_13522 346 TKTIFSLVKNESSVHVIDFGVCYGFQWPCLVKLLSERQGGPPKLRITGIELPQPGfrPAERVEETGRRLENYCKKWKVPFEYNC-LAQKWETITLE 440
                    ******************************************************9*****************************.6********** PP

           GRAS 193 eLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvEre 288
                    +L+++++E+++V++ ++l++l+de+v+++ +rd+vLkl+++++P+++v+   +  ++++ Fl+rf eal+++s+lfd++e+++ re+ +r+++E+ 
  C.cajan_13522 441 DLKIDRNEVTVVSCLYRLKNLPDETVAVNCPRDAVLKLIRKINPNIFVHGVVNGTYSAPFFLTRFREALYHFSSLFDMFEVNVLREDPQRVMLEKG 536
                    ************************************************************************************************ PP

           GRAS 289 llgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                    ++g ++ nv+acegaer+er et+++W+ r  +aG+k+v+++ + +k+ak +++k + + + v e+ +++++gWk+r L ++SaW+
  C.cajan_13522 537 MFGTDAINVIACEGAERVERPETYKQWQVRNLRAGLKQVRFDPQLVKDAKEIVKKEYHKDFVVAEDGKWVLQGWKGRILNAISAWT 622
                    *********************************************************888*************************6 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5098561.152228602IPR005202Transcription factor GRAS
PfamPF035144.0E-108256622IPR005202Transcription factor GRAS
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0010200Biological Processresponse to chitin
Sequence ? help Back to Top
Protein Sequence    Length: 624 aa     Download sequence    Send to blast
MSSNFLVESN MFSSNPLVQN YGGPISVISN QNQVTKGFEF DDSSSPSSGT SSIGESTEVT  60
KYANPILRYI SDILMDEEDD LERKPCMLQE CLRLQAAEKS FYDALGHSYP SSQRQNPSCY  120
ESVDITDSDE NYGRTASFES NSSCTTDNSY ESDLVNTVAP REKRSHQMGD DDDDASHEQE  180
GRRGNKVSAV FSDESEAPEI LDEVLSYQCG RSQSKLCATI EPSQSVVDLG GSNGKATRSR  240
SKKGSTKAGA AVDLWTLLTQ CAQAVASFDQ RNANELLSQI RQHSSPHGDG LQRLAHYFAN  300
GLEIRLAAGT PSYMPLEVAT SADMLKAYKL FVTSSPLQML SNLLTTKTIF SLVKNESSVH  360
VIDFGVCYGF QWPCLVKLLS ERQGGPPKLR ITGIELPQPG FRPAERVEET GRRLENYCKK  420
WKVPFEYNCL AQKWETITLE DLKIDRNEVT VVSCLYRLKN LPDETVAVNC PRDAVLKLIR  480
KINPNIFVHG VVNGTYSAPF FLTRFREALY HFSSLFDMFE VNVLREDPQR VMLEKGMFGT  540
DAINVIACEG AERVERPETY KQWQVRNLRA GLKQVRFDPQ LVKDAKEIVK KEYHKDFVVA  600
EDGKWVLQGW KGRILNAISA WTPA
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5b3g_A2e-4426062325380Protein SCARECROW
5b3h_A2e-4426062324379Protein SCARECROW
5b3h_D2e-4426062324379Protein SCARECROW
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_13522
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020223215.10.0scarecrow-like protein 11
TrEMBLA0A151SUP90.0A0A151SUP9_CAJCA; Scarecrow-like protein 11
STRINGGLYMA13G41261.10.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF13134339
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G59450.11e-180GRAS family protein