PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

C.cajan_13082

Common Name

KK1_013486

Organism

Cajanus cajan

Taxonomic ID

3821

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus

Family

C2H2

Protein Properties

Length: 272aa MW: 30323.9 Da PI: 7.5236

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
C.cajan_13082	genome	IIPG	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	13	0.0003	4	26	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC+ C+++Fs+ L H+++H C.cajan_13082 4 HKCKLCSRTFSNGRALGGHMKSH 26 79*******************99 PP
2	zf-C2H2	13.2	0.00026	182	204	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C+ C+k+F+++ L +H +++ C.cajan_13082 182 HRCHGCHKTFRSSRALDSHTSVC 204 79*****************9876 PP
3	zf-C2H2	13.2	0.00026	215	237	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y+Cp C+k+F + L H r+H C.cajan_13082 215 YQCPFCSKVFGSGQALGGHKRSH 237 9***************9999999 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF13912	2.4E-8	3	27	IPR007087	Zinc finger, C2H2
SuperFamily	SSF57667	4.92E-5	3	29	No hit	No description
PROSITE profile	PS50157	10.928	4	31	IPR007087	Zinc finger, C2H2
SMART	SM00355	0.011	4	26	IPR015880	Zinc finger, C2H2-like
PROSITE pattern	PS00028	0	6	26	IPR007087	Zinc finger, C2H2
SMART	SM00355	72	182	202	IPR015880	Zinc finger, C2H2-like
SuperFamily	SSF57667	6.27E-6	211	238	No hit	No description
Gene3D	G3DSA:3.30.160.60	6.9E-4	213	237	IPR013087	Zinc finger C2H2-type/integrase DNA-binding domain
Pfam	PF13912	4.5E-11	215	237	IPR007087	Zinc finger, C2H2
SMART	SM00355	0.0076	215	237	IPR015880	Zinc finger, C2H2-like
PROSITE profile	PS50157	10.221	215	237	IPR007087	Zinc finger, C2H2
PROSITE pattern	PS00028	0	217	237	IPR007087	Zinc finger, C2H2

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003676	Molecular Function	nucleic acid binding
GO:0046872	Molecular Function	metal ion binding

Sequence ? help Back to Top
Protein Sequence Length: 272 aa Download sequence Send to blast
MERHKCKLCS RTFSNGRALG GHMKSHLATL PLPPKPQPCN SSSWEDEDED EDEEKALIYY 60 GLRENPKKCF RLADPEFDTG SVVQDRESET ESKNPTGRRS KRTRRPANLD QPKRPKLSFM 120 ESPEPPALSS VSDTSPEEDV AMCLMMLSRD RWINNTTHVN VNAVAAQGSD EIKLTRVRGN 180 HHRCHGCHKT FRSSRALDSH TSVCQGLGNH NNKIYQCPFC SKVFGSGQAL GGHKRSHLVP 240 SSSSNLQLKE SFIDLNLPAP ADEDDLSVLS DA

Cis-element ? help Back to Top
Source	Link
PlantRegMap	C.cajan_13082

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_020217928.1	0.0	zinc finger protein ZAT9
TrEMBL	A0A151TJF3	0.0	A0A151TJF3_CAJCA; Uncharacterized protein
STRING	XP_007157307.1	1e-117	(Phaseolus vulgaris)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF767	34	122

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G60580.1	1e-41	C2H2-like zinc finger protein