PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_13064
Common NameKK1_013468
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family ERF
Protein Properties Length: 171aa    MW: 19117.5 Da    PI: 7.2736
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_13064genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP258.91.2e-182170255
            AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                    y+GVr +  +g+Wv+eIr+p++   + r++lg+f t+e+Aa+a++ a+++++g
  C.cajan_13064 21 TYRGVRMRQ-WGKWVSEIREPKK---KSRIWLGTFPTPEMAARAHDVAAQAIKG 70
                   69****998.**********854...6**********************99987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.730.101.1E-312179IPR001471AP2/ERF domain
PfamPF008471.3E-122170IPR001471AP2/ERF domain
PROSITE profilePS5103222.82178IPR001471AP2/ERF domain
SMARTSM003802.7E-372184IPR001471AP2/ERF domain
SuperFamilySSF541711.37E-212179IPR016177DNA-binding domain
CDDcd000186.74E-332280No hitNo description
PRINTSPR003671.7E-102233IPR001471AP2/ERF domain
PRINTSPR003671.7E-104460IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 171 aa     Download sequence    Send to blast
MEENNKKKKR ISDGNHHHHP TYRGVRMRQW GKWVSEIREP KKKSRIWLGT FPTPEMAARA  60
HDVAAQAIKG SSAFLNFPEL ASHLPRPPTT SPKDIQAAAA KAAALNCEAQ AQAQQSSNAS  120
LSGEDDAFLD LPDLLMDSGQ FRYSSPWLVV GAEHLDSAFH IEEPPFPWDC Y
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A4e-1719781272Ethylene-responsive transcription factor ERF096
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_13064
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_029127773.11e-126ethylene-responsive transcription factor ERF038
SwissprotQ8LBQ71e-49ERF34_ARATH; Ethylene-responsive transcription factor ERF034
TrEMBLA0A151TJA81e-125A0A151TJA8_CAJCA; Ethylene-responsive transcription factor ERF034 family
STRINGXP_007157270.16e-69(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF19234263
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G16750.18e-45ERF family protein
Publications ? help Back to Top
  1. Duarte JM, et al.
    Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis.
    Mol. Biol. Evol., 2006. 23(2): p. 469-78
    [PMID:16280546]
  2. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]