PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_12394
Common NameKK1_012773
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family GRF
Protein Properties Length: 331aa    MW: 36654.8 Da    PI: 8.6855
Description GRF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_12394genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRC68.77.5e-2266110145
            WRC   1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkskee 45 
                    d+epgrCrRtDGKkWRCsr++ +++k+C+rH+ r r rsrk++e+
  C.cajan_12394  66 DPEPGRCRRTDGKKWRCSRDAHPDSKYCDRHMIRRRYRSRKPVES 110
                    79****************************************986 PP

2QLQ57.83.4e-201348237
            QLQ  2 aFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiqk 37
                   +FTaaQ+++L++Q+l++KyL a++ vPp+Ll++i+k
  C.cajan_12394 13 PFTAAQWHELEHQALIFKYLKAGLSVPPDLLLPIRK 48
                   9*********************************86 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM009515.5E-121248IPR014978Glutamine-Leucine-Glutamine, QLQ
PROSITE profilePS5166623.6931348IPR014978Glutamine-Leucine-Glutamine, QLQ
PfamPF088801.6E-151347IPR014978Glutamine-Leucine-Glutamine, QLQ
PROSITE profilePS5166723.69866110IPR014977WRC domain
PfamPF088798.9E-1967109IPR014977WRC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0005524Molecular FunctionATP binding
Sequence ? help Back to Top
Protein Sequence    Length: 331 aa     Download sequence    Send to blast
MSVPPPPPPL WTPFTAAQWH ELEHQALIFK YLKAGLSVPP DLLLPIRKSL QFLSHPSLGY  60
YGKKIDPEPG RCRRTDGKKW RCSRDAHPDS KYCDRHMIRR RYRSRKPVES QSHSSSSSSS  120
ASSNPVAAAA SSTASAPASA SATASTLHTL PLHTNGAREG FSFTLGNANT NTLPHLHMDP  180
LTLPGDSAKK TYRFGLNSEA DEHNVLQKDL GSVRYQGYDF TSDGMWSHMS QIPSSTVSES  240
RSSSTMLGNC FQQQTMRDAE LLSLETARTK ELVFSGQLSS SGSLKQEYQP PQSLFSDWDW  300
KKDLSSSTIE YRPNKDFNCN PDVNVDSNGS L
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_12394
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150431e-137AP015043.1 Vigna angularis var. angularis DNA, chromosome 10, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020218094.10.0growth-regulating factor 3
TrEMBLA0A151THF10.0A0A151THF1_CAJCA; Uncharacterized protein
STRINGGLYMA01G35145.10.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF149481112
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G13960.13e-38growth-regulating factor 5