PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

C.cajan_11784

Common Name

KK1_012147

Organism

Cajanus cajan

Taxonomic ID

3821

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus

Family

TCP

Protein Properties

Length: 317aa MW: 31700.8 Da PI: 6.3934

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
C.cajan_11784	genome	IIPG	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	87.9	2.3e-27	1	100	24	101
TCP 24 lsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.eaesssssasnsssg.....................kaaksaaks 97 ++a caar+F+L++eLG+++d++tieWLlqqa+pa++++tgt++++a+++ + s +ss+s+ s++ +aa++a+ + C.cajan_11784 1 MPAACAARVFQLTRELGHKSDGETIEWLLQQAEPAVIAATGTGTIPANFTsLNISLRSSGSTMSAPshyfrgnyfnpstfststaatAAAAAAQLR 96 9**********************************************9998777778777755555556666666444333333322111111122 PP TCP 98 kksq 101 ++++ C.cajan_11784 97 NRAD 100 2222 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS51369	20.559	1	39	IPR017887	Transcription factor TCP subgroup
Pfam	PF03634	1.6E-27	1	112	IPR005333	Transcription factor, TCP

Sequence ? help Back to Top
Protein Sequence Length: 317 aa Download sequence Send to blast
MPAACAARVF QLTRELGHKS DGETIEWLLQ QAEPAVIAAT GTGTIPANFT SLNISLRSSG 60 STMSAPSHYF RGNYFNPSTF STSTAATAAA AAAQLRNRAD SSISAILNFN PMGNVNVIQQ 120 AKQELREESG GGGGLESVAS DSDGGLGRKR RPEQELSQMG SYLIQSSTGS LPASHASNTA 180 AFWMVAGHGN QGMNGGGGVG GGNNGGDNPI WAIPSVGNSG VYRGAMSAPG GIHFMNFASP 240 MSLMPGGQLG SGMVGGGGGG GGGGGGGGQL LSESNLGMLA ALNAYRQIPA NGVSESPASA 300 GQPHGGDDGR DSTSQHS

Cis-element ? help Back to Top
Source	Link
PlantRegMap	C.cajan_11784

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_007157639.1	1e-175	hypothetical protein PHAVU_002G086600g
TrEMBL	A0A151TFQ4	0.0	A0A151TFQ4_CAJCA; Transcription factor TCP14
STRING	XP_007157639.1	1e-174	(Phaseolus vulgaris)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF2120	32	80

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G58100.1	1e-34	TCP family protein