PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | C.cajan_11765 | ||||||||
Common Name | KK1_012127 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 279aa MW: 31735.5 Da PI: 6.4064 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 55.7 | 8.2e-18 | 76 | 129 | 3 | 56 |
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 k+++++ eq+++Le+ Fe +++ e++ +LA+ lgL+ rq+ +WFqNrRa++k C.cajan_11765 76 KKRRLNLEQVKTLEKSFELGNKLEPERKMQLARALGLQPRQIAIWFQNRRARWK 129 4557899**********************************************9 PP | |||||||
2 | HD-ZIP_I/II | 130.7 | 5.5e-42 | 75 | 165 | 1 | 91 |
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreel 91 ekkrrl+ eqvk+LE+sFe +kLeperK++lar+Lglqprq+a+WFqnrRAR+ktkqlEkdy+ Lkr+y+a+k++n++L++++++L++e+ C.cajan_11765 75 EKKRRLNLEQVKTLEKSFELGNKLEPERKMQLARALGLQPRQIAIWFQNRRARWKTKQLEKDYDLLKRQYEAVKSDNDALKSQNQKLQAEI 165 69**************************************************************************************987 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF46689 | 1.75E-19 | 67 | 133 | IPR009057 | Homeodomain-like |
PROSITE profile | PS50071 | 17.297 | 71 | 131 | IPR001356 | Homeobox domain |
SMART | SM00389 | 6.3E-18 | 74 | 135 | IPR001356 | Homeobox domain |
Pfam | PF00046 | 4.3E-15 | 76 | 129 | IPR001356 | Homeobox domain |
CDD | cd00086 | 8.32E-16 | 76 | 132 | No hit | No description |
Gene3D | G3DSA:1.10.10.60 | 4.3E-19 | 78 | 138 | IPR009057 | Homeodomain-like |
PRINTS | PR00031 | 1.1E-5 | 102 | 111 | IPR000047 | Helix-turn-helix motif |
PROSITE pattern | PS00027 | 0 | 106 | 129 | IPR017970 | Homeobox, conserved site |
PRINTS | PR00031 | 1.1E-5 | 111 | 127 | IPR000047 | Helix-turn-helix motif |
Pfam | PF02183 | 9.8E-16 | 131 | 171 | IPR003106 | Leucine zipper, homeobox-associated |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0009744 | Biological Process | response to sucrose | ||||
GO:0048826 | Biological Process | cotyledon morphogenesis | ||||
GO:0080022 | Biological Process | primary root development | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 279 aa Download sequence Send to blast |
MAFFPANFML QTPHHDDHQP PPSLTSMLPT CTPQEYHGGV TFLGKRSMSF SSGIEHGEEA 60 NAEEDLSDDG SQAGEKKRRL NLEQVKTLEK SFELGNKLEP ERKMQLARAL GLQPRQIAIW 120 FQNRRARWKT KQLEKDYDLL KRQYEAVKSD NDALKSQNQK LQAEILALKS REPTESINLN 180 KETEGSCSNR SENSSDIKLD ISRTPAIDSP LSTHQPSRPL FPSSARPAGV AQLFQTSSRP 240 DIQCQKIDQM VKEESLSNMF CGMDDQSGFW PWLEQQHFN |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 123 | 131 | RRARWKTKQ |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Probable transcription factor that may act in the sucrose-signaling pathway. {ECO:0000269|PubMed:11292072}. |
Binding Motif ? help Back to Top | |||
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Motif ID | Method | Source | Motif file |
MP00225 | DAP | Transfer from AT1G69780 | Download |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | C.cajan_11765 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | Retrieve |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | BT096695 | 0.0 | BT096695.1 Soybean clone JCVI-FLGm-21E13 unknown mRNA. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020217407.1 | 0.0 | homeobox-leucine zipper protein ATHB-13 | ||||
Refseq | XP_020217409.1 | 0.0 | homeobox-leucine zipper protein ATHB-13 | ||||
Swissprot | Q8LC03 | 1e-119 | ATB13_ARATH; Homeobox-leucine zipper protein ATHB-13 | ||||
TrEMBL | A0A151TFM5 | 0.0 | A0A151TFM5_CAJCA; Homeobox-leucine zipper protein ATHB-13 | ||||
STRING | XP_007157668.1 | 0.0 | (Phaseolus vulgaris) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF1271 | 33 | 106 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G69780.1 | 1e-117 | HD-ZIP family protein |
Publications ? help Back to Top | |||
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