PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_10645
Common NameKK1_010954
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family bHLH
Protein Properties Length: 509aa    MW: 56423.1 Da    PI: 6.1588
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_10645genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH482.2e-15337383455
                    HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
            HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     hn  ErrRRdriN+++ +L+el+P++      K +Ka++L  A+eY+  Lq
  C.cajan_10645 337 VHNLSERRRRDRINEKMRTLQELIPNC-----NKADKASMLDDAIEYLTTLQ 383
                    6*************************8.....6***************9998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000832.91E-16329387No hitNo description
Gene3DG3DSA:4.10.280.107.7E-20330391IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474597.85E-20330393IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088817.46333382IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000107.3E-13337383IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.6E-16339388IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 509 aa     Download sequence    Send to blast
PLHELYYVAK GKLDSKEMNN NTCGTVDQSS TLNNDLFELV WEKGQISVQG QSSRARKNPN  60
CKSFPSHSPR REVGYINANA NNVTNTRIGK YENLGGELDV SEKEEDMVMP WWNYGVDDSL  120
QHGYNSDLFH QLSGVTMNGL SSSDNFSLLD RRNNCNKVSR DTHKHSSFAS VSRVENIAEN  180
NTKGEDTQIP SFSSGFSSLK MERQGLTMCS NSSTVMNFSH FAKPAAMVRA NLEYLTSRSA  240
NISKIGQTSN LVVGESENKG EEAAAKNVEP TIVSSSVCSG NGAERGSGDP NQNLKQKSRD  300
TEDFEWQSED LEEESVGVKK DVPAPRVGSK RNRSAEVHNL SERRRRDRIN EKMRTLQELI  360
PNCNKADKAS MLDDAIEYLT TLQLQLQIMS MGSGLCMPAM MLPPGMQHMY GSPHMSPYSG  420
IGVGMQMRLG MGMHDGNDEC YRFPMIQGNQ HTQVFGLPMP MPHAPIFSFS ADQPFMSPST  480
LGLNACETMD PMPQHVQNNN ACSTNQVLL
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1341346ERRRRD
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_10645
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020212751.10.0transcription factor PIF3 isoform X2
TrEMBLA0A151TXB20.0A0A151TXB2_CAJCA; Transcription factor PIF3 (Fragment)
STRINGGLYMA19G41261.10.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF52713353
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G09530.23e-62phytochrome interacting factor 3