PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_10210
Common NameKK1_010500
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family bHLH
Protein Properties Length: 315aa    MW: 35384.6 Da    PI: 5.7167
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_10210genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH41.13.3e-13121172155
                    CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
            HLH   1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                    +r++h ++Er+RR+++N+ ++ Lr+l+P++   + ++ + a+i   A++++k+L+
  C.cajan_10210 121 QRMTHIAVERNRRKQMNEYLSVLRSLMPES---YVQRGDQASIIGGAINFVKELE 172
                    79****************************...9******************995 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:4.10.280.105.7E-14119176IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000834.29E-13119176No hitNo description
SuperFamilySSF474591.57E-16120184IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088815.402120171IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.8E-10121172IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003539.6E-10126177IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 315 aa     Download sequence    Send to blast
MALEAVVYSQ PQDPFGFGIK DPYNLLEGVG GNWGYGDFNL EQQDQACVSF LENQTENYPY  60
GDQWNMLPHI TASNPPSSET SNTHNNNNNN SNNLDSSTST PARPKRRRTK SRKNKEEIEN  120
QRMTHIAVER NRRKQMNEYL SVLRSLMPES YVQRGDQASI IGGAINFVKE LEQRLQFLGA  180
EKEKEGKSEV PFSEFFSFPQ YSTSASGGCE NSAAMSEQKG EAQSGIADIE VTMVESHASL  240
KIRSKKRPKQ LLKIVSSLHC MRLTILHLNV TTTGEIVLYS LSVKVEEDCK LGSVDEIAAA  300
VYQMLDRIQQ ESMLN
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1121132RMTHIAVERNRR
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_10210
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150381e-147AP015038.1 Vigna angularis var. angularis DNA, chromosome 5, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020213300.10.0transcription factor bHLH96
SwissprotQ9C7T43e-82BH096_ARATH; Transcription factor bHLH96
TrEMBLA0A151TW610.0A0A151TW61_CAJCA; Transcription factor bHLH96
STRINGGLYMA03G39990.10.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF71834135
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G72210.19e-75bHLH family protein
Publications ? help Back to Top
  1. Skinner MK,Rawls A,Wilson-Rawls J,Roalson EH
    Basic helix-loop-helix transcription factor gene family phylogenetics and nomenclature.
    Differentiation, 2010. 80(1): p. 1-8
    [PMID:20219281]
  2. Ezer D, et al.
    The G-Box Transcriptional Regulatory Code in Arabidopsis.
    Plant Physiol., 2017. 175(2): p. 628-640
    [PMID:28864470]