PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | C.cajan_09759 | ||||||||
Common Name | KK1_010039 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
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Family | C2H2 | ||||||||
Protein Properties | Length: 164aa MW: 18311.1 Da PI: 8.8772 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 11.6 | 0.00085 | 32 | 54 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C+ C++ Fs+ L H +H C.cajan_09759 32 FECKTCNRKFSSFQALGGHRASH 54 89**********99999998887 PP | |||||||
2 | zf-C2H2 | 14.6 | 9.3e-05 | 81 | 103 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++Cg+ Fs L H+r+H C.cajan_09759 81 HECSICGQEFSLGQALGGHMRRH 103 78********************9 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00355 | 0.19 | 32 | 54 | IPR015880 | Zinc finger, C2H2-like |
Pfam | PF13912 | 9.8E-11 | 32 | 56 | IPR007087 | Zinc finger, C2H2 |
PROSITE profile | PS50157 | 10.408 | 32 | 59 | IPR007087 | Zinc finger, C2H2 |
SuperFamily | SSF57667 | 6.83E-9 | 32 | 103 | No hit | No description |
PROSITE pattern | PS00028 | 0 | 34 | 54 | IPR007087 | Zinc finger, C2H2 |
Gene3D | G3DSA:3.30.160.60 | 4.2E-4 | 79 | 103 | IPR013087 | Zinc finger C2H2-type/integrase DNA-binding domain |
PROSITE profile | PS50157 | 9.847 | 81 | 103 | IPR007087 | Zinc finger, C2H2 |
SMART | SM00355 | 0.079 | 81 | 103 | IPR015880 | Zinc finger, C2H2-like |
Pfam | PF13912 | 9.7E-10 | 81 | 105 | IPR007087 | Zinc finger, C2H2 |
PROSITE pattern | PS00028 | 0 | 83 | 103 | IPR007087 | Zinc finger, C2H2 |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0010200 | Biological Process | response to chitin | ||||
GO:0071289 | Biological Process | cellular response to nickel ion | ||||
GO:2000280 | Biological Process | regulation of root development | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003676 | Molecular Function | nucleic acid binding | ||||
GO:0046872 | Molecular Function | metal ion binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 164 aa Download sequence Send to blast |
MEGFESIDLA NCLMLLTRPQ QSKQQSFEGV EFECKTCNRK FSSFQALGGH RASHKRSKLE 60 GDNELKSHAI SLSLGNKPKM HECSICGQEF SLGQALGGHM RRHRSSINQE FSSIKQVVTP 120 QVLPLLKRSN STRLITCLDL NLTPLENDLK LLFEKMPPNA GALV |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Probable transcription factor that may be involved in stress responses. {ECO:0000250}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | C.cajan_09759 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | BT091974 | 1e-114 | BT091974.1 Soybean clone JCVI-FLGm-9C10 unknown mRNA. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020213976.1 | 1e-118 | zinc finger protein ZAT11 | ||||
Swissprot | Q9SLD4 | 3e-45 | ZAT11_ARATH; Zinc finger protein ZAT11 | ||||
TrEMBL | A0A151TUY6 | 1e-116 | A0A151TUY6_CAJCA; Zinc finger protein 1 | ||||
STRING | GLYMA19G35740.1 | 9e-94 | (Glycine max) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF316 | 34 | 175 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G37430.1 | 1e-47 | C2H2 family protein |