PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | C.cajan_09758 | ||||||||
Common Name | KK1_010038 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
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Family | C2H2 | ||||||||
Protein Properties | Length: 125aa MW: 14136.5 Da PI: 9.9951 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 12.2 | 0.00056 | 16 | 38 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C+ C++ Fs+ L H +H C.cajan_09758 16 FECKTCNRKFSSFQALGGHRASH 38 89**********99999998887 PP | |||||||
2 | zf-C2H2 | 12.8 | 0.00036 | 65 | 87 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++Cg Fs L H+r+H C.cajan_09758 65 HECSICGLGFSLGQALGGHMRKH 87 79********************9 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF13912 | 4.9E-11 | 16 | 40 | IPR007087 | Zinc finger, C2H2 |
SMART | SM00355 | 0.19 | 16 | 38 | IPR015880 | Zinc finger, C2H2-like |
SuperFamily | SSF57667 | 3.67E-9 | 16 | 87 | No hit | No description |
PROSITE profile | PS50157 | 10.699 | 16 | 43 | IPR007087 | Zinc finger, C2H2 |
PROSITE pattern | PS00028 | 0 | 18 | 38 | IPR007087 | Zinc finger, C2H2 |
Pfam | PF13912 | 3.1E-9 | 65 | 89 | IPR007087 | Zinc finger, C2H2 |
SMART | SM00355 | 0.25 | 65 | 87 | IPR015880 | Zinc finger, C2H2-like |
PROSITE profile | PS50157 | 9.286 | 65 | 92 | IPR007087 | Zinc finger, C2H2 |
PROSITE pattern | PS00028 | 0 | 67 | 87 | IPR007087 | Zinc finger, C2H2 |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0046872 | Molecular Function | metal ion binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 125 aa Download sequence Send to blast |
MLFSCPEEKS YRGVEFECKT CNRKFSSFQA LGGHRASHKR QKLEGEEGLK EEAKTLKLWN 60 KPKMHECSIC GLGFSLGQAL GGHMRKHRAT MNQGFPSITQ VIAKTPVLKR SNSTRVMCLD 120 LELHL |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Probable transcription factor that may be involved in stress responses. {ECO:0000250}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | C.cajan_09758 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020213075.1 | 1e-88 | zinc finger protein ZAT11 | ||||
Swissprot | Q9SLD4 | 3e-30 | ZAT11_ARATH; Zinc finger protein ZAT11 | ||||
TrEMBL | A0A151TUR9 | 2e-87 | A0A151TUR9_CAJCA; Uncharacterized protein | ||||
STRING | GLYMA03G33070.1 | 2e-71 | (Glycine max) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF316 | 34 | 175 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G37430.1 | 9e-30 | C2H2 family protein |