PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_09461
Common NameKK1_009729
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family AP2
Protein Properties Length: 416aa    MW: 46427.9 Da    PI: 9.1949
Description AP2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_09461genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP254.23.7e-1761120155
            AP2   1 sgykGVrwdkkrgrWvAeIrd.pseng...kr.krfslgkfgtaeeAakaaiaarkkleg 55 
                    s y+GV++++++gr++A+++d  ++n+   k+ k+++lg ++ +e Aa+a++ a++k++g
  C.cajan_09461  61 SIYRGVTRHRWTGRYEAHLWDkSTWNQnqnKKgKQVYLGAYDDEEAAARAYDLAALKYWG 120
                    57*******************766644468557*************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008476.2E-1361120IPR001471AP2/ERF domain
SuperFamilySSF541714.38E-1761129IPR016177DNA-binding domain
SMARTSM003801.9E-2562134IPR001471AP2/ERF domain
PROSITE profilePS5103220.12662128IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.7E-1562129IPR001471AP2/ERF domain
PRINTSPR003674.1E-56374IPR001471AP2/ERF domain
PRINTSPR003674.1E-5110130IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 416 aa     Download sequence    Send to blast
MASSSSDPAK SAETSEAAAT ATPSDQLLLY RGLKKAKKER GCTAKERISK MPPCAAGKRS  60
SIYRGVTRHR WTGRYEAHLW DKSTWNQNQN KKGKQVYLGA YDDEEAAARA YDLAALKYWG  120
PGTLINFPVT DYTRDLEEMQ NVSREEYLAS LRRKSSGFSR GLSKYRGLSS RWEPSYGRMA  180
GSDYFNSIHY GDDSAAESEY ISGFCIERKI DLTSHIKWWG SNKTRHSDTG TRLSEERKLG  240
STGDICSELK QLEQKIQPTE PYQMPQLGLP LNEKKHRSSS VSALSILSKS AAYKSLQEKA  300
SKRQENSTDN DENENKNTVN KLDHGKAVEK PSNHGGNDRL DIAMGMSGTM SLQRNVYPLT  360
PFLSAPLLTA YNTVDPLVDP VLWTSLAPIL PAGLSRTAEV TKTETSSTYT MFQPEE
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_09461
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKT0310740.0KT031074.1 Glycine max clone HN_CCL_189 AP2-EREBP transcription factor (Glyma03g29240.1) mRNA, partial cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020213467.10.0AP2-like ethylene-responsive transcription factor At2g41710
SwissprotQ8GWK21e-168AP2L4_ARATH; AP2-like ethylene-responsive transcription factor At2g41710
TrEMBLA0A151TTV50.0A0A151TTV5_CAJCA; AP2-like ethylene-responsive transcription factor At2g41710 family
STRINGXP_007162184.10.0(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF60072936
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G41710.11e-159AP2 family protein