PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_09330
Common NameKK1_009594
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family GRF
Protein Properties Length: 530aa    MW: 57862.4 Da    PI: 8.9042
Description GRF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_09330genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRC76.92e-24216260145
            WRC   1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkskee 45 
                    d+epgrCrRtDGKkWRCsr+++ ++k+CErH++rgr+rsrk++e 
  C.cajan_09330 216 DPEPGRCRRTDGKKWRCSRDAVVDQKYCERHMNRGRHRSRKPVEG 260
                    79****************************************985 PP
2QLQ63.64.9e-22145181137
            QLQ   1 saFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiqk 37 
                    ++FT++Q+++L++Q+l+yKy+ an+PvP++Ll +i+k
  C.cajan_09330 145 GPFTPSQWMELEHQALIYKYITANVPVPSHLLIPIKK 181
                    59*********************************86 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM009511.6E-13145181IPR014978Glutamine-Leucine-Glutamine, QLQ
PfamPF088806.1E-16146179IPR014978Glutamine-Leucine-Glutamine, QLQ
PROSITE profilePS5166624.351146181IPR014978Glutamine-Leucine-Glutamine, QLQ
PROSITE profilePS5166725.847216260IPR014977WRC domain
PfamPF088791.0E-20217259IPR014977WRC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0005524Molecular FunctionATP binding
Sequence ? help Back to Top
Protein Sequence    Length: 530 aa     Download sequence    Send to blast
MDLGAVGLDG LVGSDTATGF GIPLASDPEA KHKWYGSGFL KQERSGATED DWRSSKLAKT  60
HHHDHGADIS ASKPMLFHHM NNTSLLRSNA PQMLSFSSQK SEPLVLDKAS PNASFPYSLH  120
HLSSYNRNTG FNSGNMHGIL AGARGPFTPS QWMELEHQAL IYKYITANVP VPSHLLIPIK  180
KALESAGFYN FSPCLLRTNN AMGWGGFHLG FSNSTDPEPG RCRRTDGKKW RCSRDAVVDQ  240
KYCERHMNRG RHRSRKPVEG QSGHALTGTT TTTTSKLVPT NNLVVPGTTT APSFAQHQPK  300
NMHPLASDTS AAPPNINRMI MNNKENGSER IIPVSDALAD LKPKENPFVV QKQQIPYEES  360
SRSEFGVVTS DSLLNPSQKS PTLLSTRIFG SSHSASNNQE SDSQHSLRQF MDDWPKTQSN  420
RSWQELDMQS DRTELSISIP MTSSDFMSST SSPTNDKVTL SPLRLSRDNN GGNDQWSSPT  480
GILQKTAFGS LSNSSAGSSP RAENKTQEGA SLCNDLLGST LGNPSSLPKL
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_09330
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150363e-81AP015036.1 Vigna angularis var. angularis DNA, chromosome 3, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020213792.10.0growth-regulating factor 1
TrEMBLA0A151TTR00.0A0A151TTR0_CAJCA; Uncharacterized protein
STRINGVIT_18s0001g08650.t010.0(Vitis vinifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF20853481
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G22840.13e-72growth-regulating factor 1