PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | C.cajan_09327 | ||||||||
Common Name | KK1_009591 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
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Family | AP2 | ||||||||
Protein Properties | Length: 581aa MW: 64093.5 Da PI: 8.4347 | ||||||||
Description | AP2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 39.2 | 1.7e-12 | 297 | 353 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrd.pse.ng.krkrfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV++++++gr++A+++d ++ g rk + g ++ +e+Aa+a++ a++k++g C.cajan_09327 297 SQYRGVTRHRWTGRYEAHLWDnSCKkEGqTRKGRQ-GGYDMEEKAARAYDLAALKYWG 353 78*******************77776664346655.77******************98 PP | |||||||
2 | AP2 | 47 | 6.4e-15 | 396 | 447 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s y+GV+++++ grW A+I + +k +lg+f t eeAa+a++ a+ k++g C.cajan_09327 396 SIYRGVTRHHQHGRWQARIGRVAG---NKDLYLGTFSTQEEAAEAYDVAAIKFRG 447 57****************988532...5*************************98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
CDD | cd00018 | 2.48E-18 | 297 | 362 | No hit | No description |
Pfam | PF00847 | 1.0E-9 | 297 | 353 | IPR001471 | AP2/ERF domain |
SuperFamily | SSF54171 | 6.47E-14 | 297 | 362 | IPR016177 | DNA-binding domain |
PROSITE profile | PS51032 | 16.937 | 298 | 361 | IPR001471 | AP2/ERF domain |
Gene3D | G3DSA:3.30.730.10 | 8.0E-12 | 298 | 361 | IPR001471 | AP2/ERF domain |
SMART | SM00380 | 4.6E-21 | 298 | 367 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 1.2E-6 | 299 | 310 | IPR001471 | AP2/ERF domain |
SuperFamily | SSF54171 | 4.58E-18 | 396 | 457 | IPR016177 | DNA-binding domain |
Pfam | PF00847 | 2.7E-10 | 396 | 447 | IPR001471 | AP2/ERF domain |
CDD | cd00018 | 4.47E-26 | 396 | 457 | No hit | No description |
PROSITE profile | PS51032 | 19.137 | 397 | 455 | IPR001471 | AP2/ERF domain |
Gene3D | G3DSA:3.30.730.10 | 4.4E-19 | 397 | 455 | IPR001471 | AP2/ERF domain |
SMART | SM00380 | 3.3E-34 | 397 | 461 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 1.2E-6 | 437 | 457 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0007276 | Biological Process | gamete generation | ||||
GO:0010492 | Biological Process | maintenance of shoot apical meristem identity | ||||
GO:0042127 | Biological Process | regulation of cell proliferation | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 581 aa Download sequence Send to blast |
MKGMNESNTD DGNNHNWLGF SLSPHMKMEA TSATVSNAAV PTSFYMSSPH MSNSGICYGV 60 GENGNFHSPL TVMPLKSDGS LCILEALSRS QTQVMVPTSS PKLEDFLGGA TMGTHEYGSH 120 ERGANAMALS LDSMYYNTQN VEAQPNRGFL SEPFRQQGHM NVQTHPYYSG LAYYQAPLGE 180 QSQQTKVTQV SVCSSLMPQM TEEGLKNWGA PRDYSTTHQQ GLEQQMNCGG TTLGSVGCGE 240 LQSLSLSMSP GSQSSCVTAP SGTDSVAVDA KKRGHGKMGQ KQPVHRKSID TFGQRTSQYR 300 GVTRHRWTGR YEAHLWDNSC KKEGQTRKGR QGGYDMEEKA ARAYDLAALK YWGPSTHINF 360 AIENYQVELE EMKNMSRQEY VAHLRRKSSG FSRGASIYRG VTRHHQHGRW QARIGRVAGN 420 KDLYLGTFST QEEAAEAYDV AAIKFRGANA VTNFDISRYD VEKIMASSNL LAGELARRNK 480 DNDPRNEAIE YNKGVATSHS NVETVQARNN NNEKNSEWKM EASPDKTGPS LLFPKPPMET 540 KIVNPIGTTV ASWLPSPTVQ MRPPPAITLS HLPVFAAWTD T |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcription activator that recognizes and binds to the DNA consensus sequence 5'-CAC[AG]N[AT]TNCCNANG-3'. Required for the initiation and growth of ovules integumenta, and for the development of female gametophyte. Plays a critical role in the development of gynoecium marginal tissues (e.g. stigma, style and septa), and in the fusion of carpels and of medial ridges leading to ovule primordia. Also involved in organs initiation and development, including floral organs. Maintains the meristematic competence of cells and consequently sustains expression of cell cycle regulators during organogenesis, thus controlling the final size of each organ by controlling their cell number. Regulates INO autoinduction and expression pattern. As ANT promotes petal cell identity and mediates down-regulation of AG in flower whorl 2, it functions as a class A homeotic gene. {ECO:0000269|PubMed:10528263, ECO:0000269|PubMed:10639184, ECO:0000269|PubMed:10948255, ECO:0000269|PubMed:11041883, ECO:0000269|PubMed:12183381, ECO:0000269|PubMed:12271029, ECO:0000269|PubMed:12655002, ECO:0000269|PubMed:8742706, ECO:0000269|PubMed:8742707, ECO:0000269|PubMed:9001406, ECO:0000269|PubMed:9093862, ECO:0000269|PubMed:9118807}. |
Binding Motif ? help Back to Top | |||
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Motif ID | Method | Source | Motif file |
MP00088 | SELEX | Transfer from AT4G37750 | Download |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | C.cajan_09327 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | Retrieve |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020210924.1 | 0.0 | AP2-like ethylene-responsive transcription factor ANT | ||||
Swissprot | Q38914 | 1e-168 | ANT_ARATH; AP2-like ethylene-responsive transcription factor ANT | ||||
TrEMBL | A0A151TTK0 | 0.0 | A0A151TTK0_CAJCA; AP2-like ethylene-responsive transcription factor ANT | ||||
STRING | XP_007136788.1 | 0.0 | (Phaseolus vulgaris) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF916 | 34 | 114 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G37750.1 | 1e-162 | AP2 family protein |