PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_08750
Common NameKK1_009007
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family YABBY
Protein Properties Length: 193aa    MW: 21759.7 Da    PI: 9.3403
Description YABBY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_08750genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1YABBY151.76.8e-47101562163
          YABBY   2 dvfssseqvCyvqCnfCntilavsvPstslfkvvtvrCGhCtsllsvnlakasqllaaeshldeslkeelleelkveeenlksnvekeesastsvs 97 
                    d++  se++Cyv+CnfCnt+lav +P + l+ +vtv+CGhC++l  ++ +  + +  + +h           +l    + + sn +k +++s+  s
  C.cajan_08750  10 DLVPPSEHLCYVRCNFCNTVLAVGIPCKRLLDTVTVKCGHCSNLSFLSTRPPNSQNQSIDH-----------TLSL--QGFYSNAKKGQASSS-SS 91 
                    77899*************************************9866544444444444443...........3322..333333333222222.22 PP

          YABBY  98 seklsenedeevprvpp.virPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknWahf 163
                    s   +++++  +p++   v++PPek+ r Psaynrf+keeiqrika+nP+i hreafsaaaknWa f
  C.cajan_08750  92 SP--TTSNESVSPKAASfVVKPPEKKHRLPSAYNRFMKEEIQRIKAANPEIPHREAFSAAAKNWARF 156
                    22..244555666666669**********************************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF046903.2E-5614156IPR006780YABBY protein
SuperFamilySSF470957.99E-9100154IPR009071High mobility group box domain
Gene3DG3DSA:1.10.30.103.0E-5109155IPR009071High mobility group box domain
CDDcd013908.81E-6117153No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0010254Biological Processnectary development
GO:0010582Biological Processfloral meristem determinacy
GO:0048479Biological Processstyle development
Sequence ? help Back to Top
Protein Sequence    Length: 193 aa     Download sequence    Send to blast
MNHDDKLTMD LVPPSEHLCY VRCNFCNTVL AVGIPCKRLL DTVTVKCGHC SNLSFLSTRP  60
PNSQNQSIDH TLSLQGFYSN AKKGQASSSS SSPTTSNESV SPKAASFVVK PPEKKHRLPS  120
AYNRFMKEEI QRIKAANPEI PHREAFSAAA KNWARFIPNS PSSSVSASKV NVRIHDHYYY  180
YFHIYLYMLL QDY
Functional Description ? help Back to Top
Source Description
UniProtRegulates carpel specification in flower development. Severe or intermediate mutation in DL causes complete or partial homeotic conversion of carpels into stamens without affecting the identities of other floral organs. Interacts antagonistically with class B genes and controls floral meristem determinacy. Regulates midrib formation in leaves probably by inducing cell proliferation in the central region of the leaf. {ECO:0000269|PubMed:14729915}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00220DAPTransfer from AT1G69180Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_08750
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKR0119241e-179KR011924.1 Thermopsis turcica CRABS CLAW mRNA, partial cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020210956.11e-124protein CRABS CLAW isoform X2
SwissprotQ76EJ04e-66YABDL_ORYSJ; Protein DROOPING LEAF
TrEMBLA0A151TRW61e-142A0A151TRW6_CAJCA; Protein DROOPING LEAF
STRINGXP_007153487.11e-123(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF102593040
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69180.12e-60YABBY family protein