PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_07494
Common NameKK1_007699
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family TCP
Protein Properties Length: 309aa    MW: 35083.2 Da    PI: 8.4805
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_07494genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP139.52.6e-43271652134
            TCP   2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssa....seceaesssssasnsssg..... 88 
                     +kkdrhskihT++g+RdRRvRls+e+a++fFdLqd+L fdk+s+t+eWL+++++ aikel+++++s +     +c+ + s+ s++n   +     
  C.cajan_07494  27 VAKKDRHSKIHTSQGLRDRRVRLSSEIARKFFDLQDMLEFDKPSNTLEWLFTKSENAIKELAQSKNSGSssggDKCSCDPSVDSNNN---Kslvas 119
                    689*************************************************************65555334444422222222222...123355 PP

            TCP  89 .kaaksaakskksqksaasalnlakesrakarararertrekmrikn 134
                      + ++  k k sq+++    + +ke r++arararert  km+ + 
  C.cajan_07494 120 gGHGSKGRKLKWSQRDDV-CVQTKKELRERARARARERTCYKMCSSR 165
                    555555556666666665.588899*******************986 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF036346.5E-4028163IPR005333Transcription factor, TCP
PROSITE profilePS5136934.8142987IPR017887Transcription factor TCP subgroup
PROSITE profilePS5137010.052143160IPR017888CYC/TB1, R domain
Sequence ? help Back to Top
Protein Sequence    Length: 309 aa     Download sequence    Send to blast
MLEHDANTNY GSHYGSISNF LTQKPAVAKK DRHSKIHTSQ GLRDRRVRLS SEIARKFFDL  60
QDMLEFDKPS NTLEWLFTKS ENAIKELAQS KNSGSSSGGD KCSCDPSVDS NNNKSLVASG  120
GHGSKGRKLK WSQRDDVCVQ TKKELRERAR ARARERTCYK MCSSRRVQQE FDERCPATAT  180
TQMLHQLRSS IQPEPDDACA RWVQPYDNPY VIDSEAPRDG FNVIEESIMI KRNMRPSSLM  240
ASHHQNQNQN LVIPRDASFN NNEYCAPLLP YSTPNWDTSG LVNGCSNFCG IGSMNLSTCF  300
MNPWYVFNF
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1145155RERARARARER
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_07494
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150410.0AP015041.1 Vigna angularis var. angularis DNA, chromosome 8, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020232454.20.0transcription factor DICHOTOMA isoform X1
RefseqXP_029128870.10.0transcription factor DICHOTOMA isoform X2
TrEMBLA0A151U6U20.0A0A151U6U2_CAJCA; Transcription factor TCP1
STRINGXP_007143293.11e-175(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF17383294
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G67260.21e-24TCP family protein