PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

C.cajan_07361

Common Name

KK1_007564

Organism

Cajanus cajan

Taxonomic ID

3821

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus

Family

C2H2

Protein Properties

Length: 410aa MW: 44842.2 Da PI: 9.6955

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
C.cajan_07361	genome	IIPG	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	15.8	3.9e-05	173	195	2	23
EETTTTEEESSHHHHHHHHHH.T CS zf-C2H2 2 kCpdCgksFsrksnLkrHirt.H 23 C++Cg++F+ ++L+ H+ + H C.cajan_07361 173 ACSHCGEVFPKMESLELHQAVrH 195 6******************9888 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE pattern	PS00028	0	172	195	IPR007087	Zinc finger, C2H2
PROSITE profile	PS50157	8.829	172	200	IPR007087	Zinc finger, C2H2
SuperFamily	SSF56399	1.34E-26	197	406	No hit	No description
Gene3D	G3DSA:3.90.228.10	3.9E-15	200	406	IPR012317	Poly(ADP-ribose) polymerase, catalytic domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003950	Molecular Function	NAD+ ADP-ribosyltransferase activity
GO:0046872	Molecular Function	metal ion binding

Sequence ? help Back to Top
Protein Sequence Length: 410 aa Download sequence Send to blast
MALLTSLPEQ ATPKHHKRKQ QQQQQQQKQK QKQKQKQKQK PPSSWDQIKN LITCKQIEGS 60 SVHDPSKGYS KLGSSCSSIC SFRDVVHGNT RVVHTSDNSS PESSSLGQET GLLTRKPVTT 120 TRSTSVSRKS NGGATYTPSS SRGMQFRKLS GCYECHMIID PSRLPIARSS VCACSHCGEV 180 FPKMESLELH QAVRHAVSEL GAEDSGRNIV EIIFKSSWLK KDNPICKIER ILKVHNTQRT 240 IQRFEECRDT VKSRALSSSK KNPRCAADGN ELLRFHCTTL TCALGARGSS SLCAAVPACG 300 VCTIIRHGFQ GADHAKLKGV RTTASSGRAH DAVLCGGDAT RRAMLVCRVI AGRVKRVAED 360 APSDEEHVSV ASYDSVAGYA GIYSNLEELV VFNPKAILPC FVVIYKVLSC

Sequence ? help Back to Top

Protein Sequence Length: 410 aa Download sequence Send to blast

MALLTSLPEQ ATPKHHKRKQ QQQQQQQKQK QKQKQKQKQK PPSSWDQIKN LITCKQIEGS  60
SVHDPSKGYS KLGSSCSSIC SFRDVVHGNT RVVHTSDNSS PESSSLGQET GLLTRKPVTT  120
TRSTSVSRKS NGGATYTPSS SRGMQFRKLS GCYECHMIID PSRLPIARSS VCACSHCGEV  180
FPKMESLELH QAVRHAVSEL GAEDSGRNIV EIIFKSSWLK KDNPICKIER ILKVHNTQRT  240
IQRFEECRDT VKSRALSSSK KNPRCAADGN ELLRFHCTTL TCALGARGSS SLCAAVPACG  300
VCTIIRHGFQ GADHAKLKGV RTTASSGRAH DAVLCGGDAT RRAMLVCRVI AGRVKRVAED  360
APSDEEHVSV ASYDSVAGYA GIYSNLEELV VFNPKAILPC FVVIYKVLSC

Cis-element ? help Back to Top
Source	Link
PlantRegMap	C.cajan_07361

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_020237933.1	0.0	uncharacterized protein LOC109817140
TrEMBL	A0A151U6M0	0.0	A0A151U6M0_CAJCA; Uncharacterized protein
STRING	XP_007160670.1	0.0	(Phaseolus vulgaris)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF10341	30	37

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G75710.1	1e-161	C2H2-like zinc finger protein