PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_06295
Common NameKK1_006472
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family GRF
Protein Properties Length: 348aa    MW: 38990.1 Da    PI: 8.0979
Description GRF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_06295genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRC79.82.5e-25134177144
            WRC   1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkske 44 
                    d+epgrCrRtDGKkWRCsr++++g+k+C+rH+hrgr+rsrk++e
  C.cajan_06295 134 DPEPGRCRRTDGKKWRCSRDAVAGQKYCDRHMHRGRNRSRKPVE 177
                    79***************************************998 PP
2QLQ47.45.8e-1777112237
            QLQ   2 aFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiqk 37 
                     F+ aQ+q+L+ Q+l++ y+ a++PvPp+Llq+i+k
  C.cajan_06295  77 CFSFAQWQELELQALIFSYMQAGVPVPPQLLQPIKK 112
                    6*********************************86 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM009515.8E-876112IPR014978Glutamine-Leucine-Glutamine, QLQ
PROSITE profilePS5166619.88377112IPR014978Glutamine-Leucine-Glutamine, QLQ
PfamPF088805.5E-1378110IPR014978Glutamine-Leucine-Glutamine, QLQ
PROSITE profilePS5166725.739134178IPR014977WRC domain
PfamPF088798.0E-22135177IPR014977WRC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0005524Molecular FunctionATP binding
Sequence ? help Back to Top
Protein Sequence    Length: 348 aa     Download sequence    Send to blast
MDLKLTQWRK QHESESESEQ HHSPKLLHPP PLPLFLPQLS TSNISDLSLL SFSNILFFPR  60
LFFNPLLSTV MLGMESCFSF AQWQELELQA LIFSYMQAGV PVPPQLLQPI KKSFLQHHHP  120
ALMESGCWGR AALDPEPGRC RRTDGKKWRC SRDAVAGQKY CDRHMHRGRN RSRKPVEVEQ  180
RHATSSSASF NRPFIQLNQR PNLETTLSFV LQPHFSCPFV LQCPCLITNF FYFCSSSWTK  240
NESKNLFEKH DHVDGDGKSG GHVLRHFFDD WPKPENGESN SGRSNSGTCL SMGITSSDVS  300
LKLSTGHGED TCHVASVGGP LAEALRSSTS TSTSSPTSVL LQLPPNSA
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_06295
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020240653.11e-171growth-regulating factor 3
TrEMBLA0A151U3F40.0A0A151U3F4_CAJCA; Uncharacterized protein
STRINGGLYMA10G07790.21e-115(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF78953242
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G52910.11e-58growth-regulating factor 4