PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | C.cajan_05401 | ||||||||
Common Name | KK1_005535 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
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Family | WRKY | ||||||||
Protein Properties | Length: 185aa MW: 21369.7 Da PI: 6.7918 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 77.2 | 2e-24 | 73 | 129 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 +D+ynW+K+ K+vkg+e+ sYY+Ct+++C vkkkve+++ d++++ei+Yeg+H h+ C.cajan_05401 73 SDEYNWKKFEDKVVKGNENQISYYKCTHPNCFVKKKVEKTK-DGEIIEIHYEGTHPHT 129 7***************************************9.***************7 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:2.20.25.80 | 8.8E-21 | 66 | 130 | IPR003657 | WRKY domain |
PROSITE profile | PS50811 | 17.511 | 67 | 131 | IPR003657 | WRKY domain |
SuperFamily | SSF118290 | 1.44E-18 | 68 | 129 | IPR003657 | WRKY domain |
SMART | SM00774 | 1.6E-19 | 72 | 130 | IPR003657 | WRKY domain |
Pfam | PF03106 | 6.8E-17 | 74 | 128 | IPR003657 | WRKY domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005794 | Cellular Component | Golgi apparatus | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 185 aa Download sequence Send to blast |
MLSIVAAIFC YCFIVLRFKL DSQPQIGTLG VEDHVTIEID AANGGERGAD HNHNRSDFQS 60 NHSNGHRQIQ LLSDEYNWKK FEDKVVKGNE NQISYYKCTH PNCFVKKKVE KTKDGEIIEI 120 HYEGTHPHTK AKHSMKRNSS HEYLYSLLPS ERDTTYLPDQ SFPSQGSGQL DYDVQHRSTQ 180 YSYEI |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | C.cajan_05401 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020207608.1 | 1e-138 | uncharacterized protein LOC109792596 isoform X1 | ||||
TrEMBL | A0A151U0W2 | 1e-137 | A0A151U0W2_CAJCA; Putative WRKY transcription factor 34 | ||||
STRING | GLYMA14G37960.1 | 5e-76 | (Glycine max) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF14743 | 10 | 12 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G26440.1 | 3e-19 | WRKY DNA-binding protein 34 |