PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | C.cajan_05146 | ||||||||
Common Name | KK1_005275 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
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Family | CAMTA | ||||||||
Protein Properties | Length: 173aa MW: 20659.7 Da PI: 10.7113 | ||||||||
Description | CAMTA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | CG-1 | 64.9 | 1.4e-20 | 125 | 167 | 36 | 78 |
CG-1 36 sgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggv 78 gsl+L++r +vr+frkDG++w+kkkd +tvrE he LKv++ C.cajan_05146 125 GGSLFLFDRMVVRFFRKDGHNWRKKKDARTVREVHETLKVNTL 167 69**************************************986 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51437 | 26.502 | 96 | 173 | IPR005559 | CG-1 DNA-binding domain |
SMART | SM01076 | 1.0E-4 | 106 | 172 | IPR005559 | CG-1 DNA-binding domain |
Pfam | PF03859 | 2.1E-15 | 124 | 166 | IPR005559 | CG-1 DNA-binding domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 173 aa Download sequence Send to blast |
VVHRNREEGH ERLFNDYFSE NPVYTETQFR RRFRMRRHVF LRVVDAISNH DEYFRMRLDA 60 TRRRGLSPLQ KCTAALRMLA YGTPADFVDE YIRIGETTAV ECLQRFVKGI CEIFREARGF 120 PGMLGGSLFL FDRMVVRFFR KDGHNWRKKK DARTVREVHE TLKVNTLHLN SKS |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | C.cajan_05146 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_024629855.1 | 1e-54 | uncharacterized protein LOC112417917 | ||||
TrEMBL | A0A151U050 | 1e-124 | A0A151U050_CAJCA; Calmodulin-binding transcription activator 2 (Fragment) | ||||
STRING | AES79342 | 6e-54 | (Medicago truncatula) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G64220.2 | 3e-18 | Calmodulin-binding transcription activator protein with CG-1 and Ankyrin domains |