PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_05093
Common NameKK1_005220
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family bHLH
Protein Properties Length: 309aa    MW: 34349.9 Da    PI: 7.0928
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_05093genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH41.23e-13104155155
                    CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
            HLH   1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                    +r++h ++Er+RR+++N+ ++ Lr+l+P++   + ++ + a+i   A++++k+L+
  C.cajan_05093 104 QRMTHIAVERNRRKQMNEYLAVLRSLMPPS---YVQRGDQASIIGGAINFVKELE 155
                    79****************************...9******************995 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000833.03E-14102159No hitNo description
Gene3DG3DSA:4.10.280.102.9E-13103158IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088815.459103154IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474597.2E-17103171IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.7E-10104155IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003538.8E-10109160IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 309 aa     Download sequence    Send to blast
MALEAVVFPQ DPFTYNCKDY LYSLIGGGTI DHTLHANWDS SSPSLLQNVK DQWDSHSSPE  60
PCTVDHSHPG PFPPPPPSSA EAATGRRKRR RTKSAKNKEE IENQRMTHIA VERNRRKQMN  120
EYLAVLRSLM PPSYVQRGDQ ASIIGGAINF VKELEQLLQC MKCQKRAQEQ GQVNGFSDSV  180
SPPFAEFFMF PQYSTRATHN TRGYPGTCEA NMTRNHSWAV ADIEVTLVDG HANIKILSKK  240
QPGLLLKMVI GLQSLGFGIL HLNVTTVDDM VLTSVSVKVE EGCQLNTVDD IAAAVHQLSR  300
TVQEEAVFS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
18690RKRRR
28691RKRRRT
3104115RMTHIAVERNRR
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_05093
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150363e-95AP015036.1 Vigna angularis var. angularis DNA, chromosome 3, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020210519.10.0transcription factor bHLH96
SwissprotQ9C7T45e-90BH096_ARATH; Transcription factor bHLH96
TrEMBLA0A151U0600.0A0A151U060_CAJCA; Transcription factor bHLH96
STRINGGLYMA14G35560.10.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF71834135
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G72210.14e-86bHLH family protein
Publications ? help Back to Top
  1. Skinner MK,Rawls A,Wilson-Rawls J,Roalson EH
    Basic helix-loop-helix transcription factor gene family phylogenetics and nomenclature.
    Differentiation, 2010. 80(1): p. 1-8
    [PMID:20219281]
  2. Ezer D, et al.
    The G-Box Transcriptional Regulatory Code in Arabidopsis.
    Plant Physiol., 2017. 175(2): p. 628-640
    [PMID:28864470]